RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MTERF1Q99551 399 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 MYLK2Q9H1R3 596 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 NCDNQ9UBB6 729 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 GIMAP2Q9UG22 337 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 BTBD3Q9Y2F9 522 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 MN1Q10571 1320 aaPredicted RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 CPED1A4D0V7 1026 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 TLCD2A6NGC4 264 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 FCHO1O14526 889 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 CAPN5O15484 640 aaPredicted RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 OR1F1O43749 312 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 CCDC22O60826 627 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 AHRP35869 848 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 RPS15AP62244 130 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 RPS13P62277 151 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 SPEM2Q0P670 501 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 SLC14A1Q13336 389 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 CSRP2Q16527 193 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 C6orf136Q5SQH8 315 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 PERM1Q5SV97 790 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 NKAIN2Q5VXU1 208 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 SPATA19Q7Z5L4 167 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 MTDHQ86UE4 582 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 ZFAND4Q86XD8 727 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 PLD3Q8IV08 490 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 CARFQ8N187 725 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 RNF175Q8N4F7 328 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 Q8N9G6 341 aaPredicted RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 MFSD9Q8NBP5 474 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 NCSTNQ92542 709 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 CMTM7Q96FZ5 175 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 PPM1MQ96MI6 270 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 EDEM2Q9BV94 578 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 LRTM1Q9HBL6 345 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 C1GALT1Q9NS00 363 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 SEMA4GQ9NTN9 838 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 FAM86C1Q9NVL1 165 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 VPS13AQ96RL7 3174 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 ANKDD1BA6NHY2 528 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 CDX4O14627 284 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 LCMT2O60294 686 aaKnown RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 PEX11AO75192 247 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 PVRP15151 417 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 CDH3P22223 829 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 CD1CP29017 333 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 CSF2RBP32927 897 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 PPM1FP49593 454 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 GFERP55789 205 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 ERVK-8P63133 956 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 IRX1P78414 480 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 DAB2P98082 770 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 GALNTL6Q49A17 601 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 SPDYAQ5MJ70 313 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 TMEM198Q66K66 360 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 RNF44Q7L0R7 432 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 C19orf47Q8N9M1 422 aaKnown RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 THAP11Q96EK4 314 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 TRAPPC9Q96Q05 1148 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 LRRC37BQ96QE4 947 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 SERPINI1Q99574 410 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 NMUR2Q9GZQ4 415 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 ZNF385DQ9H6B1 395 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 C1orf109Q9NX04 203 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 ZFP69BQ9UJL9 534 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 SLC12A4Q9UP95 1085 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 AP1M2Q9Y6Q5 423 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 UBDO15205 165 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 CLEC3AO75596 197 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 SLC34A2O95436 690 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 C9P02748 559 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 ALDOCP09972 364 aaKnown RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 HOXB3P14651 431 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 ST6GAL1P15907 406 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 NCF2P19878 526 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 ATP4BP51164 291 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 MAD2L1Q13257 205 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 SQSTM1Q13501 440 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 ZIC1Q15915 447 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 AP5B1Q2VPB7 878 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 WDR74Q6RFH5 385 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 FAM92BQ6ZTR7 304 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 TRPM8Q7Z2W7 1104 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 PLXDC1Q8IUK5 500 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 METTL2AQ96IZ6 378 aaKnown RBP9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 CATSPER2Q96P56 530 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 TGM7Q96PF1 710 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 MAP3K3Q99759 626 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 MS4A8Q9BY19 250 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 TMEM9BQ9NQ34 198 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 SAR1AQ9NR31 198 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 NMRK1Q9NWW6 199 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 ASIC5Q9NY37 505 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 VPS29Q9UBQ0 182 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 PILRAQ9UKJ1 303 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 ASXL3Q9C0F0 2248 aa9.81□□□□□ -0.84
VIPAS39-201ENST00000327028 MDC1Q14676 2089 aaKnown RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CTSVO60911 334 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 ETHE1O95571 254 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 ACPPP15309 386 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms