RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ACOT13Q9NPJ3 140 aa12.46□□□□□ -0.42
HMGCS1-201ENST00000325110 DDX28Q9NUL7 540 aaKnown RBP12.46□□□□□ -0.42
HMGCS1-201ENST00000325110 SIRT5Q9NXA8 310 aa12.46□□□□□ -0.42
HMGCS1-201ENST00000325110 GIN1Q9NXP7 522 aa12.46□□□□□ -0.42
HMGCS1-201ENST00000325110 TAS2R16Q9NYV7 291 aa12.46□□□□□ -0.42
HMGCS1-201ENST00000325110 PCDH7O60245 1069 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 AOC2O75106 756 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 SERPINB7O75635 380 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 KCNK5O95279 499 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 C9P02748 559 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 DNTTP04053 509 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 INHAP05111 366 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 SRCP12931 536 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 GADD45AP24522 165 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 RPS13P62277 151 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 C5orf22Q49AR2 442 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 CATSPEREQ5SY80 951 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 LAIR1Q6GTX8 287 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 C22orf39Q6P5X5 142 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 NCCRP1Q6ZVX7 275 aaPredicted RBP12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 LGI4Q8N135 537 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 OR9Q2Q8NGE9 314 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 VPS35Q96QK1 796 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 CWH43Q9H720 699 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 MIEF1Q9NQG6 463 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 RUVBL1Q9Y265 456 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 INSL5Q9Y5Q6 135 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 MKI67P46013 3256 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 H3BN98 237 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 TSPAN6O43657 245 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 SULT1C4O75897 302 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 SLC10A3P09131 477 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 AZGP1P25311 298 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 SLC35A2P78381 396 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 MC1RQ01726 317 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 ZZZ3Q8IYH5 903 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 SLC5A8Q8N695 610 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 NFKBIDQ8NI38 313 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 KCNS3Q9BQ31 491 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 WDR70Q9NW82 654 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 MYO9BQ13459 2157 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 C5orf58C9J3I9 102 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 CD9P21926 228 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 RYKP34925 604 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 NNMTP40261 264 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 B4GALNT1Q00973 533 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 MPPE1Q53F39 396 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 ERICH5Q6P6B1 374 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 PHF10Q8WUB8 498 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 SCRN2Q96FV2 425 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 Q96MT0 163 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 SLC12A9Q9BXP2 914 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 PALMDQ9NP74 551 aa12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 CAB39Q9Y376 341 aaPredicted RBP12.45□□□□□ -0.42
HMGCS1-201ENST00000325110 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 SLC16A6O15403 523 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 GABARAPO95166 117 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 C6orf47O95873 294 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 SLC16A8O95907 504 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 PTSQ03393 145 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 C2orf80Q0P641 193 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 IL18R1Q13478 541 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 SPDYE7PQ495Y7 208 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 CACTIN-AS1Q8N1I8 211 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 AMER2Q8N7J2 671 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 HEPHQ9BQS7 1158 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 EMILIN2Q9BXX0 1053 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 ITPAQ9BY32 194 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 NUAK2Q9H093 628 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 DSN1Q9H410 356 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 C11orf16Q9NQ32 467 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 TMEM45AQ9NWC5 275 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 RNF6Q9Y252 685 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 KCNE2Q9Y6J6 123 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 PRAMEF4O60810 478 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 SOCS5O75159 536 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 ELP6Q0PNE2 266 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 FXNQ16595 210 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 PRAMEF9Q5VWM5 478 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 EIF3MQ7L2H7 374 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 NPAS3Q8IXF0 933 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 CADM3Q8N126 398 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 TCAIMQ8N3R3 496 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 VANGL1Q8TAA9 524 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 CAPSLQ8WWF8 208 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 ZNF558Q96NG5 402 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 PKP4Q99569 1192 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 SPG21Q9NZD8 308 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 PCDHGB3Q9Y5G1 929 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 GABRR3A8MPY1 467 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 J3KTA2 159 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 SNPHO15079 494 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 SOX14O95416 240 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 JUPP14923 745 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 HOXD10P28358 340 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 LIPAP38571 399 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 MRPL19P49406 292 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 RPS26P62854 115 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 MVKQ03426 396 aa12.44□□□□□ -0.42
HMGCS1-201ENST00000325110 TCTN1Q2MV58 587 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms