RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 NPAS3Q8IXF0 933 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 SYNPOQ8N3V7 929 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 TERB1Q8NA31 727 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 GPR156Q8NFN8 814 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 OR9A1PQ8NGU1 263 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 CXorf40BQ96DE9 158 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 ZNF514Q96K75 400 aaPredicted RBP20.64■□□□□ 0.89
LIMS2-201ENST00000324938 TRIM39Q9HCM9 518 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 TM9SF3Q9HD45 589 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 ITM2CQ9NQX7 267 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 SIRT5Q9NXA8 310 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 DEC1Q9P2X7 70 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 ATXN10Q9UBB4 475 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 ABCG2Q9UNQ0 655 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 SH2B3Q9UQQ2 575 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 U3KQV3 271 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 ATG2AQ2TAZ0 1938 aa20.64■□□□□ 0.89
LIMS2-201ENST00000324938 C17orf113A0A1B0GUU1 675 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 C1orf226A1L170 272 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 MGAT4DA6NG13 374 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 PCDH7O60245 1069 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 SH3BGRLO75368 114 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 PAPLNO95428 1278 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 JUNBP17275 347 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 PPIBP23284 216 aaKnown RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 EEF1B2P24534 225 aaKnown RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 RAD23AP54725 363 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 TPD52P55327 224 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 VEZF1Q14119 521 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 CATSPEREQ5SY80 951 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 ZNF547Q8IVP9 402 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 LAS2Q8IYD9 372 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 CHDHQ8NE62 594 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 VPS37AQ8NEZ2 397 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 PPP1R16AQ96I34 528 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 ZFYVE19Q96K21 471 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 CNDP2Q96KP4 475 aaKnown RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 SAMD11Q96NU1 681 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 CHST8Q9H2A9 424 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 EHD1Q9H4M9 534 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 LTB4R2Q9NPC1 389 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 WBP1LQ9NX94 342 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 CORO2BQ9UQ03 480 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 ORC6Q9Y5N6 252 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 LOC100130705A0A1B0GUX0 176 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 FOXE1O00358 373 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 PLK4O00444 970 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 SLC16A6O15403 523 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 LZTS3O60299 673 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 IL7RP16871 459 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 POLR2IP36954 125 aaKnown RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 SLBPQ14493 270 aaKnown RBP eCLIP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 NEDD8Q15843 81 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 TMEM52BQ4KMG9 183 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 AP1ARQ63HQ0 302 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 OR2T5Q6IEZ7 315 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 TMEM26Q6ZUK4 368 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 CBLL1Q75N03 491 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 EIF3MQ7L2H7 374 aaKnown RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 RBM23Q86U06 439 aaKnown RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 LRRC56Q8IYG6 542 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 OR2T29Q8NH02 315 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 FAM129BQ96TA1 746 aa20.63■□□□□ 0.89
LIMS2-201ENST00000324938 DPH2Q9BQC3 489 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-201ENST00000324938 GNG14A0A1W2PPG7 69 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 OTOL1A6NHN0 477 aaPredicted RBP20.62■□□□□ 0.89
LIMS2-201ENST00000324938 MMP20O60882 483 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 ABCB7O75027 752 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 C1GALT1C1LP0DN25 315 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 ITGAMP11215 1152 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 CDK4P11802 303 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 EFNA1P20827 205 aaPredicted RBP20.62■□□□□ 0.89
LIMS2-201ENST00000324938 GABARAPL2P60520 117 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 LRRC74AQ0VAA2 488 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 IL18R1Q13478 541 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 STARD3Q14849 445 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 PAGE2BQ5JRK9 111 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 C6orf141Q5SZD1 244 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 R3HCC1LQ7Z5L2 792 aaKnown RBP20.62■□□□□ 0.89
LIMS2-201ENST00000324938 ADNPQ9H2P0 1102 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 DPEP2Q9H4A9 486 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 CDH7Q9ULB5 785 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 GPR34Q9UPC5 381 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 A0A1B0GVG6 124 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 PIPSLA2A3N6 862 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 FABP3P05413 133 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 RB1P06400 928 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 TAP2Q03519 686 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 ZNF234Q14588 700 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 SKIV2LQ15477 1246 aaKnown RBP20.62■□□□□ 0.89
LIMS2-201ENST00000324938 CTU2Q2VPK5 515 aaKnown RBP20.62■□□□□ 0.89
LIMS2-201ENST00000324938 FAM78AQ5JUQ0 283 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 ZNF691Q5VV52 312 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 TRMT11Q7Z4G4 463 aaKnown RBP20.62■□□□□ 0.89
LIMS2-201ENST00000324938 ZFP90Q8TF47 636 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 SNX19Q92543 992 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 TMEM245Q9H330 911 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 PRM3Q9NNZ6 103 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 DMRT3Q9NQL9 472 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 ATP6V1HQ9UI12 483 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms