RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 CLIP3Q96DZ5 547 aa17.3■□□□□ 0.36
PRKCB-202ENST00000321728 APIPQ96GX9 242 aa17.3■□□□□ 0.36
PRKCB-202ENST00000321728 CCM2Q9BSQ5 444 aa17.3■□□□□ 0.36
PRKCB-202ENST00000321728 EBPLQ9BY08 206 aa17.3■□□□□ 0.36
PRKCB-202ENST00000321728 RLIMQ9NVW2 624 aa17.3■□□□□ 0.36
PRKCB-202ENST00000321728 CBX4O00257 560 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 CA12O43570 354 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 YES1P07947 543 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 ZNF7P17097 686 aaPredicted RBP17.29■□□□□ 0.36
PRKCB-202ENST00000321728 TWF1Q12792 350 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 FOXD4Q12950 439 aaPredicted RBP17.29■□□□□ 0.36
PRKCB-202ENST00000321728 BAK1Q16611 211 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 RNF165Q6ZSG1 346 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 ZNF367Q7RTV3 350 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 FAM9CQ8IZT9 166 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 DEPDC4Q8N2C3 294 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 OR10G2Q8NGC3 310 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 SLC29A3Q9BZD2 475 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 GPR63Q9BZJ6 419 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 MAGEH1Q9H213 219 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 TIGARQ9NQ88 270 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 NUFIP1Q9UHK0 495 aaKnown RBP17.29■□□□□ 0.36
PRKCB-202ENST00000321728 NUDT7P0C024 238 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 CR2P20023 1033 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 ARPP19P56211 112 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 PPIGQ13427 754 aaKnown RBP eCLIP17.29■□□□□ 0.36
PRKCB-202ENST00000321728 IQCCQ4KMZ1 466 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 TMPRSS11AQ6ZMR5 421 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 SERPINA9Q86WD7 417 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 SUSD3Q96L08 255 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 MCCC1Q96RQ3 725 aaPredicted RBP17.29■□□□□ 0.36
PRKCB-202ENST00000321728 PTPN18Q99952 460 aa17.29■□□□□ 0.36
PRKCB-202ENST00000321728 B4GALT3O60512 393 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 GPX2P18283 190 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 MAPK1P28482 360 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 KCNQ1P51787 676 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 KCNJ10P78508 379 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 TUSC3Q13454 348 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 EIF4HQ15056 248 aaKnown RBP17.28■□□□□ 0.36
PRKCB-202ENST00000321728 Q5BKY6 102 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 VN1R5Q7Z5H4 357 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 SUN5Q8TC36 379 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 MAL2Q969L2 176 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 OGDHLQ9ULD0 1010 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 PRSS21Q9Y6M0 314 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 A0A075B6Q4 140 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 A0A1W2PQ09 198 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 GPX5O75715 221 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 TNFRSF1BP20333 461 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 ZXDBP98169 803 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 CD83Q01151 205 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 SMARCB1Q12824 385 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 FAM214AQ32MH5 1076 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 CLECL1Q8IZS7 167 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 ASPNQ9BXN1 380 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 C3orf14Q9HBI5 128 aa17.28■□□□□ 0.36
PRKCB-202ENST00000321728 AFF4Q9UHB7 1163 aaKnown RBP17.28■□□□□ 0.36
PRKCB-202ENST00000321728 H3BM21 787 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 H7C0S8 307 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 CRYZL1O95825 349 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 IL7P13232 177 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 POU2F1P14859 743 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 CTPS1P17812 591 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 RPS19P39019 145 aaKnown RBP17.27■□□□□ 0.36
PRKCB-202ENST00000321728 ZNF648Q5T619 568 aaPredicted RBP17.27■□□□□ 0.36
PRKCB-202ENST00000321728 ATCAYQ86WG3 371 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 LAX1Q8IWV1 398 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 DENND6BQ8NEG7 585 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 WDR36Q8NI36 951 aaKnown RBP17.27■□□□□ 0.36
PRKCB-202ENST00000321728 VANGL1Q8TAA9 524 aaPredicted RBP17.27■□□□□ 0.36
PRKCB-202ENST00000321728 UBASH3BQ8TF42 649 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 C8orf48Q96LL4 319 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 CITED4Q96RK1 184 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 NIPSNAP1Q9BPW8 284 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 AP5M1Q9H0R1 490 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 ABCB8Q9NUT2 735 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 PCDHGA2Q9Y5H1 932 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 TRPV2Q9Y5S1 764 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 ZFP37Q9Y6Q3 630 aaPredicted RBP17.27■□□□□ 0.36
PRKCB-202ENST00000321728 GREB1Q4ZG55 1949 aa17.27■□□□□ 0.36
PRKCB-202ENST00000321728 CCDC182A6NF36 153 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 PRAMEF12O95522 483 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 ZNF865P0CJ78 1059 aaPredicted RBP17.27■□□□□ 0.35
PRKCB-202ENST00000321728 RPS24P62847 133 aaKnown RBP17.27■□□□□ 0.35
PRKCB-202ENST00000321728 TAF10Q12962 218 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 GPAT3Q53EU6 434 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 YIF1BQ5BJH7 314 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 CEP78Q5JTW2 689 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 GDF6Q6KF10 455 aaPredicted RBP17.27■□□□□ 0.35
PRKCB-202ENST00000321728 LYPD8Q6UX82 237 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 KRT73Q86Y46 540 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 SYT12Q8IV01 421 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 SIX5Q8N196 739 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 ZBTB2Q8N680 514 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 SLC7A6Q92536 515 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 RNF170Q96K19 258 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 SLC6A14Q9UN76 642 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 GABRQQ9UN88 632 aa17.27■□□□□ 0.35
PRKCB-202ENST00000321728 CFAP20Q9Y6A4 193 aaKnown RBP17.27■□□□□ 0.35
PRKCB-202ENST00000321728 V9GYH0 126 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms