RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 OCA2Q04671 838 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 SP140Q13342 867 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 STARD3Q14849 445 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 ZNF284Q2VY69 593 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 TTC23LQ6PF05 361 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 TMEM220Q6QAJ8 160 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 C2orf73Q8N5S3 287 aaPredicted RBP16.81■□□□□ 0.28
COL9A1-201ENST00000320755 OR7G3Q8NG95 312 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 HHIPL1Q96JK4 782 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 HEPHQ9BQS7 1158 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 COQ6Q9Y2Z9 468 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 PCDHB11Q9Y5F2 797 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 WNT6Q9Y6F9 365 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 KPNA5O15131 536 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 PCDH7O60245 1069 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 ITGAMP11215 1152 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 HOXA9P31269 272 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 VIPR1P32241 457 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 RPP38P78345 283 aaKnown RBP16.8■□□□□ 0.28
COL9A1-201ENST00000320755 GAB1Q13480 694 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 GRIN2CQ14957 1233 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 TMEM236Q5W0B7 351 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 ZDHHC20Q5W0Z9 365 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 OTOP2Q7RTS6 562 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 ADIPOR2Q86V24 386 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 ST13P5Q8NFI4 369 aaPredicted RBP16.8■□□□□ 0.28
COL9A1-201ENST00000320755 ZNF689Q96CS4 500 aaPredicted RBP16.8■□□□□ 0.28
COL9A1-201ENST00000320755 PKP4Q99569 1192 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 APOL4Q9BPW4 351 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 CATP04040 527 aaKnown RBP16.8■□□□□ 0.28
COL9A1-201ENST00000320755 CSF2RAP15509 400 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 TIMP2P16035 220 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 CD6P30203 668 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 IDUAP35475 653 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 CREMQ03060 361 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 ADPRMQ3LIE5 342 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 ZC3H12BQ5HYM0 836 aaKnown RBP16.8■□□□□ 0.28
COL9A1-201ENST00000320755 CATSPEREQ5SY80 951 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 EGFLAMQ63HQ2 1017 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 ZNF852Q6ZMS4 543 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 EIF3MQ7L2H7 374 aaKnown RBP16.8■□□□□ 0.28
COL9A1-201ENST00000320755 OR4A15Q8NGL6 344 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 RPL3LQ92901 407 aaKnown RBP16.8■□□□□ 0.28
COL9A1-201ENST00000320755 IRF7Q92985 503 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 NEIL2Q969S2 332 aa16.8■□□□□ 0.28
COL9A1-201ENST00000320755 FAM120CQ9NX05 1096 aaKnown RBP16.8■□□□□ 0.28
COL9A1-201ENST00000320755 SCAMP2O15127 329 aaKnown RBP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 SLC16A5O15375 505 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 SUV39H1O43463 412 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 SLCO2B1O94956 709 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 NADKO95544 446 aaPredicted RBP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 CYP2A6P11509 494 aaPredicted RBP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 IL1RNP18510 177 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 POLR2EP19388 210 aaKnown RBP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 RRM2P31350 389 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 MASP1P48740 699 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 NCS1P62166 190 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 MC1RQ01726 317 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 CBLL1Q75N03 491 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 VPS37AQ8NEZ2 397 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 OR8J2Q8NGG1 315 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 AP2M1Q96CW1 435 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 TMEM121BQ9BXQ6 578 aaPredicted RBP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 SPATA6Q9NWH7 488 aaPredicted RBP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 NINQ8N4C6 2090 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 TGFB1P01137 390 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 FUCA1P04066 466 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 CTSLP07711 333 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 GSTM1P09488 218 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 IMPA1P29218 277 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 RAE1P78406 368 aaKnown RBP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 GSTM4Q03013 218 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 TMEM115Q12893 351 aaPredicted RBP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 CSTF3Q12996 717 aaKnown RBP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 IL18R1Q13478 541 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 PAGE2BQ5JRK9 111 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 BRAT1Q6PJG6 821 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 ANKRD13BQ86YJ7 626 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 CCDC71Q8IV32 467 aaPredicted RBP16.79■□□□□ 0.28
COL9A1-201ENST00000320755 OR5AK3PQ8NH89 298 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 ALOXE3Q9BYJ1 711 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 ACSL6Q9UKU0 697 aa16.79■□□□□ 0.28
COL9A1-201ENST00000320755 KPNA3O00505 521 aaPredicted RBP16.78■□□□□ 0.28
COL9A1-201ENST00000320755 LCKP06239 509 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 ETFAP13804 333 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 SLC35A2P78381 396 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 SYT16Q17RD7 645 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 COX20Q5RI15 118 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 ERICH5Q6P6B1 374 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 CFAP206Q8IYR0 622 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 TRUB1Q8WWH5 349 aaKnown RBP16.78■□□□□ 0.28
COL9A1-201ENST00000320755 SH3YL1Q96HL8 342 aaPredicted RBP16.78■□□□□ 0.28
COL9A1-201ENST00000320755 OR51B5Q9H339 312 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 TMEM184CQ9NVA4 438 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 SELENONQ9NZV5 590 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 ERVW-1Q9UQF0 538 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 KIAA0100Q14667 2235 aaKnown RBP16.78■□□□□ 0.28
COL9A1-201ENST00000320755 RGS10O43665 173 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 PCDHGA12O60330 932 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms