RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 PEX5LQ8IYB4 626 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 TTC9BQ8N6N2 239 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 OR52E4Q8NGH9 312 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 TADA1Q96BN2 335 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 MED30Q96HR3 178 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 IL4I1Q96RQ9 567 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 CINPQ9BW66 212 aaPredicted RBP9.34□□□□□ -0.91
PTPRA-202ENST00000318266 BARHL1Q9BZE3 327 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 ABCB9Q9NP78 766 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 MAT2BQ9NZL9 334 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 TLR6Q9Y2C9 796 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 ZSWIM8A7E2V4 1837 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 TRIP12Q14669 1992 aaPredicted RBP9.34□□□□□ -0.91
PTPRA-202ENST00000318266 TNFRSF11BO00300 401 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 PDHXO00330 501 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 PRAMEF11O60813 436 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 SCO1O75880 301 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 PRAMEF12O95522 483 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 ACPPP15309 386 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 GGT2P36268 569 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 DDX39BQ13838 428 aaKnown RBP9.34□□□□□ -0.91
PTPRA-202ENST00000318266 TAF1AQ15573 450 aaPredicted RBP9.34□□□□□ -0.91
PTPRA-202ENST00000318266 ZNF79Q15937 498 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 UPP1Q16831 310 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 DUSP28Q4G0W2 176 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 YIF1BQ5BJH7 314 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 FAHD1Q6P587 224 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 LINGO4Q6UY18 593 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 PLPP6Q8IY26 295 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 ZZZ3Q8IYH5 903 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 ZNF683Q8IZ20 524 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 NATD1Q8N6N6 113 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 ASB15Q8WXK1 588 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 TRIM63Q969Q1 353 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 APIPQ96GX9 242 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 RNF170Q96K19 258 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 TRIB3Q96RU7 358 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 PITX2Q99697 317 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 TMEM45AQ9NWC5 275 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 ZNF226Q9NYT6 803 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 NPAP1Q9NZP6 1156 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 MALT1Q9UDY8 824 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 DNMT3LQ9UJW3 386 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 RPS6KA6Q9UK32 745 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 A3GALT2U3KPV4 340 aa9.34□□□□□ -0.91
PTPRA-202ENST00000318266 TRAV19A0A0A6YYK7 116 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 HMX3A6NHT5 357 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 WASH4PA8MWX3 477 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 CBX4O00257 560 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 TNFRSF10BO14763 440 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 EPN2O95208 641 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 SNX4O95219 450 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 EPB42P16452 691 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 ITGA2P17301 1181 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 SDC1P18827 310 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 MYL9P24844 172 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 UQCRC1P31930 480 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 TIE1P35590 1138 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 ZNF792Q3KQV3 632 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 ABI3BPQ7Z7G0 1075 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 FAM124AQ86V42 546 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 OR10G2Q8NGC3 310 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 GRPEL2Q8TAA5 225 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 TMEM203Q969S6 136 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 CCDC32Q9BV29 185 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 C11orf54Q9H0W9 315 aaPredicted RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 ELOVL6Q9H5J4 265 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 OLA1Q9NTK5 396 aaKnown RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 SPEF1Q9Y4P9 236 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 RALGAPA2Q2PPJ7 1873 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 A0A0B4J293 547 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 LOC105371267A0A1B0GV96 52 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 TMCC2O75069 709 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 PRLP01236 227 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 PRKACBP22694 351 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 KIR3DL1P43629 444 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 ITGA1P56199 1179 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 RAB25P57735 213 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 SPIBQ01892 262 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 SEMG2Q02383 582 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 UBE3AQ05086 875 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 CSTF3Q12996 717 aaKnown RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 SSX1Q16384 188 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 LRIF1Q5T3J3 769 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 PTOV1Q86YD1 416 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 ZNF296Q8WUU4 475 aaPredicted RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 PEX13Q92968 403 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 OMA1Q96E52 524 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 RNF31Q96EP0 1072 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 C1orf74Q96LT6 269 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 GFM1Q96RP9 751 aaKnown RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 UCK2Q9BZX2 261 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 ABHD16BQ9H3Z7 469 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 SLA2Q9H6Q3 261 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 STMN3Q9NZ72 180 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 CRNNQ9UBG3 495 aaPredicted RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 ST3GAL5Q9UNP4 418 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 GRIP1Q9Y3R0 1128 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 CFAP20Q9Y6A4 193 aaKnown RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 V9GYH0 126 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms