RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 PGM5Q15124 567 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 BCL2A1Q16548 175 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 FGD3Q5JSP0 725 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 SIGIRRQ6IA17 410 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF621Q6ZSS3 439 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 GAREM2Q75VX8 874 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 SPRED1Q7Z699 444 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 SLC44A3Q8N4M1 653 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 OR1J4Q8NGS1 313 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ADAMTS14Q8WXS8 1223 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 KIAA1191Q96A73 305 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 PHF21BQ96EK2 531 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 OR4K3Q96R72 315 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 FCRL5Q96RD9 977 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 POLR2J2Q9GZM3 115 aaKnown RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 SPATA31A1Q5TZJ5 1347 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 IQCMA0A1B0GVH7 501 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 GPR25O00155 361 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 POLRMTO00411 1230 aaKnown RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 F10P00742 488 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 MT-ND5P03915 603 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 NELFEP18615 380 aaKnown RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 TCEA1P23193 301 aaKnown RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 IVDP26440 423 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 MAOBP27338 520 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 MRPL19P49406 292 aaKnown RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 CRADDP78560 199 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 RGS1Q08116 209 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF234Q14588 700 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 UBE2R2Q712K3 238 aaPredicted RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 SERPINA11Q86U17 422 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 OR52K1Q8NGK4 314 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF675Q8TD23 568 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 P2RY11Q96G91 374 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 NDC1Q9BTX1 674 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 SLC2A11Q9BYW1 496 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 SEMA4CQ9C0C4 833 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 MROH8Q9H579 483 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 PIF1Q9H611 641 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 UFSP2Q9NUQ7 469 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 TAS2R3Q9NYW6 316 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 RPS6KB2Q9UBS0 482 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 INTS6Q9UL03 887 aaKnown RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 CDC14AQ9UNH5 594 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 OR2AT4A6NND4 320 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ADAP00813 363 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 FGBP02675 491 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 STAG3L1P0CL83 205 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 RPS3P23396 243 aaKnown RBP eCLIP4.39□□□□□ -1.713e-8■□□□□ 9.6
CNOT1-201ENST00000317147 BRCC3P46736 316 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 GALK2Q01415 458 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 DEFA6Q01524 100 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 DDX39BQ13838 428 aaKnown RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 AP5B1Q2VPB7 878 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 AWAT2Q6E213 333 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 KIAA1211LQ6NV74 962 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 EEPD1Q7L9B9 569 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ING5Q8WYH8 240 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 USP7Q93009 1102 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ACDQ96AP0 544 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ZDHHC5Q9C0B5 715 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 HMX1Q9NP08 348 aaPredicted RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF275Q9NSD4 429 aaPredicted RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 INTS7Q9NVH2 962 aaKnown RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ACTR10Q9NZ32 417 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 TRAPPC4Q9Y296 219 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 C12orf71A8MTZ7 269 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 SMLR1H3BR10 107 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 CDC7O00311 574 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 STK25O00506 426 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 FAAHO00519 579 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 TOR1BO14657 336 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 P2RX6O15547 441 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 BUD23O43709 281 aaKnown RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 GALP22466 123 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 AVPR1AP37288 418 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 OPRL1P41146 370 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 CEBPGP53567 150 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 BLOC1S1P78537 153 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 PRR5P85299 388 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 SLC25A11Q02978 314 aaKnown RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 FOXD4Q12950 439 aaPredicted RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF267Q14586 743 aaPredicted RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 IRF4Q15306 451 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 RNF212Q495C1 297 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 MSS51Q4VC12 460 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 SLC27A1Q6PCB7 646 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 NCEH1Q6PIU2 408 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 LSMEM2Q8N112 164 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ATP6V1C2Q8NEY4 427 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ATP13A2Q9NQ11 1180 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 AJAP1Q9UKB5 411 aaPredicted RBP4.39□□□□□ -1.71
CNOT1-201ENST00000317147 KCNIP3Q9Y2W7 256 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 PMF1-BGLAPU3KQ54 211 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 EFCAB7A8K855 629 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 AGRPO00253 132 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 CSF1P09603 554 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 ETFAP13804 333 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 APLP1P51693 650 aa4.39□□□□□ -1.71
CNOT1-201ENST00000317147 TAS2R31P59538 309 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms