RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FKBPLQ9UIM3 349 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CMAHPQ9Y471 501 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 OARD1Q9Y530 152 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HSPB11Q9Y547 144 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PCDHB11Q9Y5F2 797 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SNX8Q9Y5X2 465 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ARL5AQ9Y689 179 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 INMT-MINDY4F8WBC2 141 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CACNB4O00305 520 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 INSIG1O15503 277 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GPR32O75388 356 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TNFRSF21O75509 655 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 B3GAT3O94766 335 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PTHP01270 115 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SEMG1P04279 462 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF286BP0CG31 522 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CBSLP0DN79 551 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 COX7A2P14406 83 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 IL32P24001 234 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CBSP35520 551 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HMGA2P52926 109 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 C21orf58P58505 322 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 BAMBIQ13145 260 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 IKZF1Q13422 519 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HACD4Q5VWC8 232 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 LAPTM4BQ86VI4 370 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 FAM20CQ8IXL6 584 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PHACTR4Q8IZ21 702 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TAGAPQ8N103 731 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 L3MBTL4Q8NA19 623 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TOR1AIP2Q8NFQ8 470 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 RNF170Q96K19 258 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 EXOC2Q96KP1 924 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MCCC1Q96RQ3 725 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MND1Q9BWT6 205 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PRRG3Q9BZD7 231 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ZC4H2Q9NQZ6 224 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 THSD1Q9NS62 852 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GPR83Q9NYM4 423 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 IL17CQ9P0M4 197 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF282Q9UDV7 671 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 F5H5T6 163 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 FFAR3O14843 346 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GPR42O15529 346 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CLDN11O75508 207 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 KCNK5O95279 499 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 DPEP1P16444 411 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ENGP17813 658 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MAPK12P53778 367 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SRP54P61011 504 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SNRPGP62308 76 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MLLT11Q13015 90 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TNK1Q13470 666 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 EFR3AQ14156 821 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GPR19Q15760 415 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HKDC1Q2TB90 917 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SMUG1Q53HV7 270 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 FAAH2Q6GMR7 532 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 FRMPD2BQ6IN97 320 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CASP12Q6UXS9 341 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 NLGN4XQ8N0W4 816 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 LINC00471Q8N535 108 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 DUSP18Q8NEJ0 188 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 LRRC20Q8TCA0 184 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 APH1BQ8WW43 257 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 KCTD7Q96MP8 289 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CIPCQ9C0C6 399 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TAF1LQ8IZX4 1826 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF623O75123 536 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 DDX5P17844 614 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GABRB1P18505 474 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 AZGP1P25311 298 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PSPHP78330 225 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TUSC3Q13454 348 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CDONQ4KMG0 1287 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 FAM171A1Q5VUB5 890 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PDE12Q6L8Q7 609 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TRIM40Q6P9F5 258 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SPATC1Q76KD6 591 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 KIF18BQ86Y91 864 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 RASAL3Q86YV0 1011 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 FAM46DQ8NEK8 389 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GPRC5AQ8NFJ5 357 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 OR8J2Q8NGG1 315 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 BTN2A2Q8WVV5 523 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 APOLD1Q96LR9 279 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CDK15Q96Q40 435 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TEFMQ96QE5 360 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SDHCQ99643 169 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SPON2Q9BUD6 331 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CXCL16Q9H2A7 254 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CLEC4MQ9H2X3 399 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SLC32A1Q9H598 525 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TMEM30AQ9NV96 361 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ERVK13-1Q9NX77 482 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MIOSQ9NXC5 875 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 FLRT1Q9NZU1 646 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 AGO1Q9UL18 857 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 RAB23Q9ULC3 237 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SCML2Q9UQR0 700 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms