RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CLCA3PQ9Y6N3 262 aa17.47■□□□□ 0.39
SPSB4-201ENST00000310546 CASTOR2A6NHX0 329 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 HAS3O00219 553 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 SCAMP3O14828 347 aaKnown RBP17.46■□□□□ 0.39
SPSB4-201ENST00000310546 TSPAN3O60637 253 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 CCNDBP1O95273 360 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 C1QCP02747 245 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 IL6P05231 212 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 CSF3P09919 207 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 CSTF2P33240 577 aaKnown RBP eCLIP17.46■□□□□ 0.39
SPSB4-201ENST00000310546 STC1P52823 247 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 NADSYN1Q6IA69 706 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 DOK6Q6PKX4 331 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 RERGLQ9H628 205 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 TRIM45Q9H8W5 580 aaPredicted RBP17.46■□□□□ 0.39
SPSB4-201ENST00000310546 POPDC3Q9HBV1 291 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 FARSBQ9NSD9 589 aaKnown RBP17.46■□□□□ 0.39
SPSB4-201ENST00000310546 MCUBQ9NWR8 336 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 MS4A12Q9NXJ0 267 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 B3GNT2Q9NY97 397 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 NEU3Q9UQ49 428 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 ALG5Q9Y673 324 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 TSC2P49815 1807 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 J3KR12 359 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 PIRO00625 290 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 POMCP01189 267 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 RPS3P23396 243 aaKnown RBP eCLIP17.46■□□□□ 0.39
SPSB4-201ENST00000310546 IL32P24001 234 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 CD52P31358 61 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 SLC14A1Q13336 389 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 ATCAYQ86WG3 371 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 KRT73Q86Y46 540 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 REPS1Q96D71 796 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 SMOQ99835 787 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 NIPAL2Q9H841 368 aa17.46■□□□□ 0.39
SPSB4-201ENST00000310546 EIF3KQ9UBQ5 218 aaKnown RBP17.46■□□□□ 0.39
SPSB4-201ENST00000310546 FABP12A6NFH5 140 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 OR1I1O60431 355 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 MTRF1O75570 445 aaKnown RBP17.45■□□□□ 0.38
SPSB4-201ENST00000310546 COL6A1P12109 1028 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 ZNF30P17039 623 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 IL1RNP18510 177 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 ALAS2P22557 587 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 SOX9P48436 509 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 RORCP51449 518 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 PYDC2Q56P42 97 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 SAXO2Q658L1 398 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 XKRXQ6PP77 449 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 PLEKHM3Q6ZWE6 761 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 CALHM3Q86XJ0 350 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 RNF130Q86XS8 419 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 LIX1LQ8IVB5 337 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 SIDT2Q8NBJ9 832 aaKnown RBP17.45■□□□□ 0.38
SPSB4-201ENST00000310546 B3GNT7Q8NFL0 401 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 EEF1AKMT1Q8WVE0 214 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 PCNPQ8WW12 178 aaKnown RBP17.45■□□□□ 0.38
SPSB4-201ENST00000310546 DIRAS2Q96HU8 199 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 CATSPERBQ9H7T0 1116 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 ATP13A1Q9HD20 1204 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 UBQLN1Q9UMX0 589 aaKnown RBP17.45■□□□□ 0.38
SPSB4-201ENST00000310546 PAGE1O75459 146 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 HOXB8P17481 243 aaPredicted RBP17.45■□□□□ 0.38
SPSB4-201ENST00000310546 SOX3P41225 446 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 PSPHP78330 225 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 CDC42EP1Q00587 391 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 FAM122CQ6P4D5 195 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 CCDC149Q6ZUS6 474 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 HSH2DQ96JZ2 352 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 FCRL2Q96LA5 508 aaPredicted RBP17.45■□□□□ 0.38
SPSB4-201ENST00000310546 C1QTNF3Q9BXJ4 246 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 ABCB9Q9NP78 766 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 PLCXD1Q9NUJ7 323 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 OGDHLQ9ULD0 1010 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 RALGAPA2Q2PPJ7 1873 aa17.45■□□□□ 0.38
SPSB4-201ENST00000310546 F8W810 466 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 TSPAN19P0C672 248 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 NAT2P11245 290 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 HLA-DMAP28067 261 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 GGT2P36268 569 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 CDKN2CP42773 168 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 BRCC3P46736 316 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 GZMMP51124 257 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 DOC2BQ14184 412 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 SSX1Q16384 188 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 UBXN11Q5T124 520 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 FAHD1Q6P587 224 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 ALKAL1Q6UXT8 129 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 WDR36Q8NI36 951 aaKnown RBP17.44■□□□□ 0.38
SPSB4-201ENST00000310546 RAET1EQ8TD07 263 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 TMEM80Q96HE8 168 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 PPP3R2Q96LZ3 170 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 CPPED1Q9BRF8 314 aaPredicted RBP17.44■□□□□ 0.38
SPSB4-201ENST00000310546 IMPAD1Q9NX62 359 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 DERAQ9Y315 318 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 CMAHPQ9Y471 501 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 TNPO3Q9Y5L0 923 aaKnown RBP17.44■□□□□ 0.38
SPSB4-201ENST00000310546 SEPT4O43236 478 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 TNNI3P19429 210 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 FAM189BP81408 668 aa17.44■□□□□ 0.38
SPSB4-201ENST00000310546 CSTF3Q12996 717 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms