RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 PRIM2P49643 509 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 CDC42P60953 191 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 PURAQ00577 322 aaKnown RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 CD83Q01151 205 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 PPIGQ13427 754 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 SF1Q15637 639 aaKnown RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 NOXRED1Q6NXP6 359 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 NEK5Q6P3R8 708 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 PTCHD4Q6ZW05 846 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 ZNF551Q7Z340 670 aaPredicted RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 KRT73Q86Y46 540 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 FAM217AQ8IXS0 508 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 PDLIM5Q96HC4 596 aaKnown RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 FUBP3Q96I24 572 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 CCM2Q9BSQ5 444 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 SLC29A3Q9BZD2 475 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 TNKS2Q9H2K2 1166 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 SLC32A1Q9H598 525 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 ZFYVE1Q9HBF4 777 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 FNDC1Q4ZHG4 1894 aaPredicted RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 CCDC182A6NF36 153 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 ADAMDEC1O15204 470 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 TRBC1P01850 177 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 DUSP4Q13115 394 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 CD300LGQ6UXG3 332 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 CBLL1Q75N03 491 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 TRIM48Q8IWZ4 208 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 OR6F1Q8NGZ6 308 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 VANGL1Q8TAA9 524 aaPredicted RBP10.78□□□□□ -0.68
PTPN7-201ENST00000309017 OR5M11Q96RB7 305 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 NTMT1Q9BV86 223 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 MMP28Q9H239 520 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 P2RY12Q9H244 342 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 DKK3Q9UBP4 350 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 MAN2B2Q9Y2E5 1009 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 TNS1Q9HBL0 1735 aaKnown RBP10.78□□□□□ -0.68
PTPN7-201ENST00000309017 A0A0U1RQF3 1178 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 GNG14A0A1W2PPG7 69 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 CENPBD1B2RD01 187 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 SH3BP5O60239 455 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 CLDN11O75508 207 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 CSF2P04141 144 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 PRPS1L1P21108 318 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 TNFSF8P32971 234 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 GZMMP51124 257 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 IRF8Q02556 426 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 SMU1Q2TAY7 513 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 PDZK1Q5T2W1 519 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 RGMBQ6NW40 437 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 FAM131AQ6UXB0 335 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 ADGRG2Q8IZP9 1017 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 SLC34A3Q8N130 599 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 SIX5Q8N196 739 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 CAMKK1Q8N5S9 505 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 OR9Q1Q8NGQ5 310 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 IL4I1Q96RQ9 567 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 PARK7Q99497 189 aaKnown RBP10.78□□□□□ -0.68
PTPN7-201ENST00000309017 TCF25Q9BQ70 676 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 ASPNQ9BXN1 380 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 SMURF1Q9HCE7 757 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 FBXL12Q9NXK8 326 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 SLC22A14Q9Y267 594 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 H3BM21 787 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 TMCC2O75069 709 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 CHIT1Q13231 466 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 GANABQ14697 944 aaKnown RBP10.78□□□□□ -0.68
PTPN7-201ENST00000309017 FAM214AQ32MH5 1076 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 B3GNT7Q8NFL0 401 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 GPR156Q8NFN8 814 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 CSGALNACT1Q8TDX6 532 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 BRI3BPQ8WY22 251 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 TRIM63Q969Q1 353 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 MYO19Q96H55 970 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 IRF2BPLQ9H1B7 796 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 PLSCR3Q9NRY6 295 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 A3GALT2U3KPV4 340 aa10.78□□□□□ -0.68
PTPN7-201ENST00000309017 MYADML2A6NDP7 307 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 MGAT4DA6NG13 374 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 RGS13O14921 159 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 ARHGEF9O43307 516 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 CXCR2P25025 360 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 SRSF11Q05519 484 aaKnown RBP10.77□□□□□ -0.68
PTPN7-201ENST00000309017 LRRC74AQ0VAA2 488 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 PTCHD3Q3KNS1 767 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 CHCHD4Q8N4Q1 142 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 NLGN2Q8NFZ4 835 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 OR9Q2Q8NGE9 314 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 CMTM7Q96FZ5 175 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 SNX18Q96RF0 628 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 PITX2Q99697 317 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 GKN1Q9NS71 199 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 RLIMQ9NVW2 624 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 CLN6Q9NWW5 311 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 FLRT1Q9NZU1 646 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 DNMT3LQ9UJW3 386 aa10.77□□□□□ -0.68
PTPN7-201ENST00000309017 GLYATL1P3A0A0U1RQE8 302 aa10.77□□□□□ -0.69
PTPN7-201ENST00000309017 FAM25AB3EWG3 89 aa10.77□□□□□ -0.69
PTPN7-201ENST00000309017 FAM25CB3EWG5 89 aa10.77□□□□□ -0.69
PTPN7-201ENST00000309017 FAM25GB3EWG6 89 aa10.77□□□□□ -0.69
PTPN7-201ENST00000309017 CLDN7O95471 211 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms