RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ZNF843Q8N446 348 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 FSTL5Q8N475 847 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 PCYOX1LQ8NBM8 494 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 HIPK4Q8NE63 616 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 PPHLN1Q8NEY8 458 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TNIP2Q8NFZ5 429 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TSPAN14Q8NG11 270 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ZFP28Q8NHY6 868 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ITFG2Q969R8 447 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 BIRC7Q96CA5 298 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 MFSD3Q96ES6 412 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 MYEOVQ96EZ4 313 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 SLC45A3Q96JT2 553 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 SCYL1Q96KG9 808 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CNDP2Q96KP4 475 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 LMLNQ96KR4 655 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 RANBP9Q96S59 729 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 IL12RB2Q99665 862 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 PKP2Q99959 881 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 HOPXQ9BPY8 73 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TBL1YQ9BQ87 522 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ANKRD60Q9BZ19 345 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 MAGEB5Q9BZ81 275 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 NUF2Q9BZD4 464 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TRIM15Q9C019 465 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TMEM245Q9H330 911 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 WDR55Q9H6Y2 383 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 COPS7BQ9H9Q2 264 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CLK4Q9HAZ1 481 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 GLOD4Q9HC38 313 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 SPAG4Q9NPE6 437 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TLR8Q9NR97 1041 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 CHRAC1Q9NRG0 131 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 IARS2Q9NSE4 1012 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 IGSF5Q9NSI5 407 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 PIGVQ9NUD9 493 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TMEM181Q9P2C4 612 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 SLC17A6Q9P2U8 582 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 SERGEFQ9UGK8 458 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 RSL24D1Q9UHA3 163 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ZDHHC2Q9UIJ5 367 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 AGO1Q9UL18 857 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 MFHAS1Q9Y4C4 1052 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 PCDHGA7Q9Y5G6 932 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 ITPR2Q14571 2701 aa4.77□□□□□ -1.65
CKS1B-201ENST00000308987 SPTBN1Q01082 2364 aaKnown RBP4.77□□□□□ -1.65
CKS1B-201ENST00000308987 TYW5A2RUC4 315 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 TRIM64BA6NI03 449 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 KCNK1O00180 336 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 PSMD12O00232 456 aaPredicted RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CFLARO15519 480 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 FLRT2O43155 660 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 TNFSF14O43557 240 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 PCDHGA12O60330 932 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 NRP2O60462 931 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 VPS4BO75351 444 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 GPC4O75487 556 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 RNASEH2AO75792 299 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 ZMPSTE24O75844 475 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 SRP72O76094 671 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 IPO13O94829 963 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 SORBS2O94875 1100 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 OR6B1O95007 311 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 PGM3O95394 542 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CER1O95813 267 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 KNG1P01042 644 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 NPPAP01160 153 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 JCHAINP01591 159 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 SCG5P05408 212 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 FYNP06241 537 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CHRNGP07510 517 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 FGF4P08620 206 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 UMPSP11172 480 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CDK4P11802 303 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 FCGR1AP12314 374 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 HSD17B1P14061 328 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 PLA2G2AP14555 144 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CDH2P19022 906 aaPredicted RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 IMPDH1P20839 514 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 NMBRP28336 390 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 GABRB3P28472 473 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 OXTRP30559 389 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 ADRA1AP35348 466 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 EIF2S3P41091 472 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 LEPRP48357 1165 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 SLC12A2P55011 1212 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 NME5P56597 212 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 ESRRGP62508 458 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 MPP1Q00013 466 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 ACAP2Q15057 778 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 DLG2Q15700 870 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 TBC1D25Q3MII6 688 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 ZBED5Q49AG3 693 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 TECRLQ5HYJ1 363 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 BRMS1LQ5PSV4 323 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 SYPL2Q5VXT5 272 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 NXNQ6DKJ4 435 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 DENND5AQ6IQ26 1287 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms