RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 C3orf18Q9UK00 162 aa18.81■□□□□ 0.6
PDZRN3-202ENST00000308537 CDC14AQ9UNH5 594 aa18.81■□□□□ 0.6
PDZRN3-202ENST00000308537 NOVA2Q9UNW9 492 aaKnown RBP18.81■□□□□ 0.6
PDZRN3-202ENST00000308537 CSAG2Q9Y5P2 127 aa18.81■□□□□ 0.6
PDZRN3-202ENST00000308537 CPAMD8Q8IZJ3 1885 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 SCN2AQ99250 2005 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 TTLL8A6PVC2 850 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 IDSB3KWA1 339 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 TXNDC9O14530 226 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 EIF3HO15372 352 aaKnown RBP eCLIP18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 ENO2P09104 434 aaPredicted RBP18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 COX6A1P12074 109 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 CCND1P24385 295 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 OCA2Q04671 838 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 RBBP7Q16576 425 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 TUBB8Q3ZCM7 444 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 PLEKHN1Q494U1 663 aaPredicted RBP18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 CAPN13Q6MZZ7 669 aaPredicted RBP18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 CYS1Q717R9 158 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 PDSS2Q86YH6 399 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 BBOF1Q8ND07 529 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 OR9A4Q8NGU2 314 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 CPT1CQ8TCG5 803 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 ANKRD7Q92527 254 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 THAP11Q96EK4 314 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 MMABQ96EY8 250 aaPredicted RBP18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 TRPC4Q9UBN4 977 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 NBPF19A0A087WUL8 3843 aa18.8■□□□□ 0.6
PDZRN3-202ENST00000308537 LOC102723996A0A087X1L8 192 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 TCRBV9S1A1TA0A576 114 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 NSA2O95478 260 aaKnown RBP18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 CASQ1P31415 396 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 UQCRFS1P47985 274 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 INPP5JQ15735 1006 aaPredicted RBP18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 Q6ZS92 163 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 CAPN12Q6ZSI9 719 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 MAATS1Q7Z4T9 603 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 PALM2Q8IXS6 379 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 KCT2Q8NC54 265 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 ZNF740Q8NDX6 193 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 PSMF1Q92530 271 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 MOCOSQ96EN8 888 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 SAYSD1Q9NPB0 183 aa18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 MKKSQ9NPJ1 570 aaPredicted RBP18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 MTO1Q9Y2Z2 717 aaKnown RBP18.79■□□□□ 0.6
PDZRN3-202ENST00000308537 ICE1Q9Y2F5 2266 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 NPEPPSL1A6NEC2 478 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 FAM159BA6NKW6 160 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 CYSRT1A8MQ03 144 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 H0YIG0 161 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 NDC80O14777 642 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 JRKO75564 520 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 BMP10O95393 424 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 GUCA1CO95843 209 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 HPP00738 406 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 HIST1H2AGP0C0S8 130 aaPredicted RBP18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 HIST1H2ADP20671 130 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 ITGA3P26006 1051 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 MEF2AQ02078 507 aaPredicted RBP18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 CATSPEREQ5SY80 951 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 TMEM205Q6UW68 189 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 PARP9Q8IXQ6 854 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 AFAP1L2Q8N4X5 818 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 MFSD9Q8NBP5 474 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 FBXO25Q8TCJ0 367 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 PYROXD1Q8WU10 500 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 NEIL2Q969S2 332 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 ALKBH8Q96BT7 664 aaKnown RBP18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 HIST1H2AHQ96KK5 128 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 HIST1H2AJQ99878 128 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 HAUS8Q9BT25 410 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 H2AFJQ9BTM1 129 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 PHACTR1Q9C0D0 580 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 C14orf105Q9NVL8 296 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 G3BP2Q9UN86 482 aaKnown RBP18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 MAST4O15021 2626 aa18.78■□□□□ 0.6
PDZRN3-202ENST00000308537 PRPF4O43172 522 aaKnown RBP eCLIP18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 ACPPP15309 386 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 IL1RNP18510 177 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 SAT1P21673 171 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 EMP2P54851 167 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 CDKL1Q00532 357 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 GUCY2DQ02846 1103 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 TSNQ15631 228 aaKnown RBP18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 ASPGQ86U10 573 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 CUZD1Q86UP6 607 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 NKAPQ8N5F7 415 aaKnown RBP18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 GALNT11Q8NCW6 608 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 BARD1Q99728 777 aaKnown RBP18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 CAB39LQ9H9S4 337 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 POPDC3Q9HBV1 291 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 NSMCE4AQ9NXX6 385 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 B3GNT3Q9Y2A9 372 aa18.77■□□□□ 0.6
PDZRN3-202ENST00000308537 NAV2Q8IVL1 2488 aa18.77■□□□□ 0.59
PDZRN3-202ENST00000308537 SVILO95425 2214 aa18.77■□□□□ 0.59
PDZRN3-202ENST00000308537 IGHV1-45A0A0A0MS14 117 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 IPO13O94829 963 aaKnown RBP18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 KLHL18O94889 574 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 ALPPP05187 535 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 SLC6A12P48065 614 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms