RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 S100ZQ8WXG8 99 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 TRIT1Q9H3H1 467 aaKnown RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 NLE1Q9NVX2 485 aaPredicted RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 TMEM9Q9P0T7 183 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 SPATA7Q9P0W8 599 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 IL20RAQ9UHF4 553 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 INSL6Q9Y581 213 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 VCANP13611 3396 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 C5orf58C9J3I9 102 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 UPK1AO00322 258 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 PCDHGA12O60330 932 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 SCELO95171 688 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 IGFBP1P08833 259 aaPredicted RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 SLC26A3P40879 764 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 MC1RQ01726 317 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 CSTF3Q12996 717 aaKnown RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 CTF1Q16619 201 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 FAM131AQ6UXB0 335 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 SLC16A12Q6ZSM3 486 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 TMEM173Q86WV6 379 aaPredicted RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 COLGALT2Q8IYK4 626 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 SLC5A8Q8N695 610 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 OR4A15Q8NGL6 344 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 PHF10Q8WUB8 498 aaKnown RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 PHOX2BQ99453 314 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 ACPTQ9BZG2 426 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 PLSCR3Q9NRY6 295 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 TRPM5Q9NZQ8 1165 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 COMMD3Q9UBI1 195 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 PCDHB8Q9UN66 801 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 CLCA3PQ9Y6N3 262 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 ALPK3Q96L96 1907 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 TMEM221A6NGB7 291 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 CENPXA8MT69 81 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 UGT2B11O75310 529 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 TUFMP49411 452 aaKnown RBP14.1□□□□□ -0.15
PTPN9-201ENST00000306726 ATP4BP51164 291 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 SELENBP1Q13228 472 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 SNAP47Q5SQN1 464 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 TMEM240Q5SV17 173 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 LAIR1Q6GTX8 287 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 NEK5Q6P3R8 708 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 LILRA3Q8N6C8 439 aaPredicted RBP14.1□□□□□ -0.15
PTPN9-201ENST00000306726 STARD8Q92502 1023 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 MYO19Q96H55 970 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 NEDD4LQ96PU5 975 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 CH25HO95992 272 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 SOX6P35712 828 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 TTLL9Q3SXZ7 439 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 SETMARQ53H47 684 aaPredicted RBP14.1□□□□□ -0.15
PTPN9-201ENST00000306726 PYDC2Q56P42 97 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.1□□□□□ -0.15
PTPN9-201ENST00000306726 RTP2Q5QGT7 225 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 LGI4Q8N135 537 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 C1GALT1C1Q96EU7 318 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 SUSD3Q96L08 255 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 ZNF382Q96SR6 550 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 OR51B5Q9H339 312 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 TPT1P8Q9HAU6 139 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 BEX1Q9HBH7 125 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 VPS9D1Q9Y2B5 631 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 LOC285095A0A1B0GVY8 99 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 SLC22A1O15245 554 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 RFPL2O75678 378 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 NPRL3Q12980 569 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 HECTD3Q5T447 861 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 FAM171BQ6P995 826 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 LIMS2Q7Z4I7 341 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 APCDD1Q8J025 514 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 PIH1D2Q8WWB5 315 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 ZNF689Q96CS4 500 aaPredicted RBP14.1□□□□□ -0.15
PTPN9-201ENST00000306726 ZNF558Q96NG5 402 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 SIRT5Q9NXA8 310 aa14.1□□□□□ -0.15
PTPN9-201ENST00000306726 WBP11Q9Y2W2 641 aaKnown RBP14.1□□□□□ -0.15
PTPN9-201ENST00000306726 H7C4K7 107 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 MEN1O00255 615 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 IL18R1Q13478 541 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 RSPO2Q6UXX9 243 aaPredicted RBP14.09□□□□□ -0.15
PTPN9-201ENST00000306726 OTOP2Q7RTS6 562 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 OR5M11Q96RB7 305 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 YME1L1Q96TA2 773 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 NUSAP1Q9BXS6 441 aaKnown RBP14.09□□□□□ -0.15
PTPN9-201ENST00000306726 TDRD15B5MCY1 1934 aaKnown RBP14.09□□□□□ -0.15
PTPN9-201ENST00000306726 TRAV19A0A0A6YYK7 116 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 M0QZQ0 153 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 KIAA0513O60268 411 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 KLKB1P03952 638 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 FCER2P06734 321 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 KDELR2P33947 212 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 PTGER3P43115 390 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 HTRA4P83105 476 aaPredicted RBP14.09□□□□□ -0.15
PTPN9-201ENST00000306726 ZMAT1Q5H9K5 638 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 BEND5Q7L4P6 421 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 RBFAQ8N0V3 343 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 IQCF1Q8N6M8 205 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 OR10G2Q8NGC3 310 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 SGK2Q9HBY8 427 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 ACOT13Q9NPJ3 140 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 ZNF221Q9UK13 617 aa14.09□□□□□ -0.15
PTPN9-201ENST00000306726 SMLR1H3BR10 107 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms