RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 HEATR1Q9H583 2144 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 BCAS2O75934 225 aaPredicted RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ACVR2AP27037 513 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 TMBIM6P55061 237 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 METTL2BQ6P1Q9 378 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF280BQ86YH2 543 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 KBTBD2Q8IY47 623 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ZZZ3Q8IYH5 903 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PPP1R14BQ96C90 147 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CMTM7Q96FZ5 175 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF184Q99676 751 aaPredicted RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CXorf56Q9H5V9 222 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ACP6Q9NPH0 428 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 FARSBQ9NSD9 589 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 KLRF1Q9NZS2 232 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PLLPQ9Y342 182 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 HCN4Q9Y3Q4 1203 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 HSPA12AO43301 675 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 UBOX5O94941 541 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 GJB6O95452 261 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PDYNP01213 254 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 LINGO3P0C6S8 592 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 SRCP12931 536 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 UGT1A1P22309 533 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CHRNB4P30926 498 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 MAP3K8P41279 467 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 RBM34P42696 430 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 LIPEQ05469 1076 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 LMAN2Q12907 356 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ARFRP1Q13795 201 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 GTF2H2Q13888 395 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 NRF1Q16656 503 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PM20D1Q6GTS8 502 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 GTF2H2CQ6P1K8 395 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 HTR3DQ70Z44 454 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 NET1Q7Z628 596 aaPredicted RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 LINC00471Q8N535 108 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC2A13Q96QE2 648 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 OSBPL11Q9BXB4 747 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ABCB10Q9NRK6 738 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 BTRCQ9Y297 605 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 DOCK8Q8NF50 2099 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CHD5Q8TDI0 1954 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 FAM240BA0A1B0GVZ2 78 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PDPK1O15530 556 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 FARS2O95363 451 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 GOT2P00505 430 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 LINC00032P0C843 101 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CHRNB2P17787 502 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 BNIP1Q12981 228 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ECH1Q13011 328 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CTBP1Q13363 440 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 FASTKD3Q14CZ7 662 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CDKL4Q5MAI5 379 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 RNASEH2BQ5TBB1 312 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 TMPPEQ6ZT21 453 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PRSS58Q8IYP2 241 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 KAT2AQ92830 837 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 MFSD3Q96ES6 412 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 OSER1Q9NX31 292 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 RIMKLBQ9ULI2 386 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 SCN3AQ9NY46 2000 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 NOS1APO75052 506 aaPredicted RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CDK4P11802 303 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 GADD45AP24522 165 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 EIF5AL1Q6IS14 154 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC39A4Q6P5W5 647 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ZYG11AQ6WRX3 759 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 B3GNT6Q6ZMB0 384 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CPNE9Q8IYJ1 553 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 OR2T12Q8NG77 320 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 GPR151Q8TDV0 419 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC29A3Q9BZD2 475 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 DNAJB4Q9UDY4 337 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 A0A075B6Q4 140 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 BLACEA4D250 179 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 KLF8O95600 359 aaPredicted RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF806P0C7X5 589 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 STOMP27105 288 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 GRK5P34947 590 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF33BQ06732 778 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 DHCR24Q15392 516 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PRAMEF14Q5SWL7 426 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 LRIF1Q5T3J3 769 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PRAMEF13Q5VWM6 474 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PAMR1Q6UXH9 720 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PCDHB18PQ96TA0 734 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 GPATCH1Q9BRR8 931 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 SIX4Q9UIU6 781 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ANXA4P09525 319 aaPredicted RBP8.09□□□□□ -1.11
PCDHB1-201ENST00000306549 PIRTP0C851 137 aa8.09□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF41P51814 821 aaPredicted RBP8.09□□□□□ -1.11
PCDHB1-201ENST00000306549 XIAPP98170 497 aa8.09□□□□□ -1.11
PCDHB1-201ENST00000306549 PAOXQ6QHF9 649 aa8.09□□□□□ -1.11
PCDHB1-201ENST00000306549 ZCCHC23Q6ZST2 131 aa8.09□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF709Q8N972 641 aa8.09□□□□□ -1.11
PCDHB1-201ENST00000306549 LRRC57Q8N9N7 239 aa8.09□□□□□ -1.11
PCDHB1-201ENST00000306549 AP1S3Q96PC3 154 aa8.09□□□□□ -1.11
PCDHB1-201ENST00000306549 RBM4BQ9BQ04 359 aaKnown RBP8.09□□□□□ -1.11
PCDHB1-201ENST00000306549 RBM4Q9BWF3 364 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms