RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 SDHAF3Q9NRP4 125 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 TRNAU1APQ9NX07 287 aaKnown RBP8.95□□□□□ -0.98
PTPRE-202ENST00000306042 PLCL2Q9UPR0 1127 aa8.95□□□□□ -0.98
PTPRE-202ENST00000306042 E7ESA3 106 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 NUAK1O60285 661 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 SLC16A8O95907 504 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 JUNP05412 331 aaKnown RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 C8orf89P0DMQ9 161 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 FOXN2P32314 431 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 GSSP48637 474 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 HSPA13P48723 471 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 AGTR2P50052 363 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 CLCN7P51798 805 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 CDKN2DP55273 166 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 ID2Q02363 134 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 KLF10Q13118 480 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 DECR1Q16698 335 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 TNFAIP8L2Q6P589 184 aaPredicted RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 TIFABQ6ZNK6 161 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 SPRED2Q7Z698 418 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 OR4K17Q8NGC6 315 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 OR4K14Q8NGD5 310 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 DAZLQ92904 295 aaKnown RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 ADI1Q9BV57 179 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 ARNT2Q9HBZ2 717 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 SRPK3Q9UPE1 567 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 A0A0J9YY10 115 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 OR10H3O60404 316 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 PLGP00747 810 aaPredicted RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 MTHFD1P11586 935 aaKnown RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 FDXRP22570 491 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 SLC7A1P30825 629 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 HOXC12P31275 282 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 OPRD1P41143 372 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 RANBP1P43487 201 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 DLX2Q07687 328 aaPredicted RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 NXPE4Q6UWF7 544 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 TRIM69Q86WT6 500 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 PIANPQ8IYJ0 282 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 DEPDC7Q96QD5 511 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 NPAS2Q99743 824 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 PLA2G2FQ9BZM2 168 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 TMEM9BQ9NQ34 198 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 LYVE1Q9Y5Y7 322 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 ENTPD5O75356 428 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 TRAPPC6AO75865 159 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 AGR2O95994 175 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 SCTRP47872 440 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 EPHA5P54756 1037 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 SH3BGRP55822 239 aaPredicted RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 PER3P56645 1201 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 SMAD2Q15796 467 aaKnown RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 EIF3MQ7L2H7 374 aaKnown RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 OR5M3Q8NGP4 307 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 RASSF5Q8WWW0 418 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 FAM117AQ9C073 453 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 EPB41L1Q9H4G0 881 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 NEK6Q9HC98 313 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 MOCS1Q9NZB8 636 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 OR6C2Q9NZP2 312 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 LTBP1Q14766 1721 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 FEZF1A0PJY2 475 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 UGT2B17O75795 530 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 CCNA2P20248 432 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 TPP2P29144 1249 aaPredicted RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 FCHO2Q0JRZ9 810 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 SIX1Q15475 284 aaPredicted RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 CATSPEREQ5SY80 951 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 MANEALQ5VSG8 457 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 PPP1R3BQ86XI6 285 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 C1orf210Q8IVY1 113 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 GALNT15Q8N3T1 639 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 TEX26Q8N6G2 289 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 OR52E1Q8NGJ3 308 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 PKP4Q99569 1192 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 EDEM2Q9BV94 578 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 MKRN2Q9H000 416 aaKnown RBP8.94□□□□□ -0.98
PTPRE-202ENST00000306042 ACTL8Q9H568 366 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 RDH14Q9HBH5 336 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 DLGAP4Q9Y2H0 992 aa8.94□□□□□ -0.98
PTPRE-202ENST00000306042 GRXCR2A6NFK2 248 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 GLOD5A6NK44 160 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 AGPSO00116 658 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 TRIM38O00635 465 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 RPLP0P05388 317 aaKnown RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF24P17028 368 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 RPL34P49207 117 aaKnown RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 TMED10P49755 219 aaKnown RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 CRISP3P54108 245 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 MAZP56270 477 aaKnown RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 SPIBQ01892 262 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 SEMA3BQ13214 749 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 IYDQ6PHW0 289 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 P4HA3Q7Z4N8 544 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 RANBP3LQ86VV4 465 aaPredicted RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 NRROSQ86YC3 692 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 PGBD5Q8N414 524 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 DCBLD2Q96PD2 775 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 YIPF4Q9BSR8 244 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 SLC12A9Q9BXP2 914 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms