RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PTX3P26022 381 aaPredicted RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 ADPRHP54922 357 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 THEMIS2Q5TEJ8 643 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 ADNP2Q6IQ32 1131 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 GCNT7Q6ZNI0 430 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 R3HCC1LQ7Z5L2 792 aaKnown RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 C17orf64Q86WR6 236 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 EID3Q8N140 333 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 CBR4Q8N4T8 237 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 ABHD11Q8NFV4 315 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 GANCQ8TET4 914 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 FAM162AQ96A26 154 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 SCARF2Q96GP6 870 aaPredicted RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 RNF145Q96MT1 663 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 PANX1Q96RD7 426 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 MYCBPQ99417 103 aaPredicted RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 CENPKQ9BS16 269 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 RAB11FIP5Q9BXF6 653 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 ANKRD60Q9BZ19 345 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 MYNNQ9NPC7 610 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 DCAF13Q9NV06 445 aaKnown RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 CLDND1Q9NY35 253 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 PADI4Q9UM07 663 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 CORO2BQ9UQ03 480 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 WBP11Q9Y2W2 641 aaKnown RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 AP1M2Q9Y6Q5 423 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 PCM1Q15154 2024 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 ARHGAP10A1A4S6 786 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 RNASET2O00584 256 aaKnown RBP18.68■□□□□ 0.58
HOXC4-201ENST00000303406 ADAM23O75077 832 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 CREG1O75629 220 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 LINGO3P0C6S8 592 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 BMP8BP34820 402 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 LTBRP36941 435 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 TSTA3Q13630 321 aaPredicted RBP18.68■□□□□ 0.58
HOXC4-201ENST00000303406 PDE7AQ13946 482 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 CPZQ66K79 652 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 TMIGD1Q6UXZ0 262 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 IKBIPQ70UQ0 350 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 ANKRD46Q86W74 232 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 PHACTR4Q8IZ21 702 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 OR14C36Q8NHC7 312 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 GFM2Q969S9 779 aaKnown RBP18.68■□□□□ 0.58
HOXC4-201ENST00000303406 CNBD2Q96M20 576 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 IL17FQ96PD4 163 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 SEPHS2Q99611 448 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 REEP4Q9H6H4 257 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 TM7SF3Q9NS93 570 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 ATAD3AQ9NVI7 634 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 OR1A2Q9Y585 309 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 PCDHB11Q9Y5F2 797 aa18.68■□□□□ 0.58
HOXC4-201ENST00000303406 FAM149AA5PLN7 773 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 GABRR3A8MPY1 467 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 VGLL3A8MV65 326 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 CLIC1O00299 241 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 EGFP01133 1207 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 CEACAM5P06731 702 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 LAMP1P11279 417 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 IGFALSP35858 605 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 CLCNKAP51800 687 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 REEP5Q00765 189 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 ARMCX6Q7L4S7 300 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 COMMD6Q7Z4G1 85 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 SMRP1Q8NCR6 262 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 DENND6BQ8NEG7 585 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 GOT1L1Q8NHS2 421 aaPredicted RBP18.67■□□□□ 0.58
HOXC4-201ENST00000303406 TFAP2CQ92754 450 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 TRAPPC9Q96Q05 1148 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 AIF1LQ9BQI0 150 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 TBCDQ9BTW9 1192 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 APOOQ9BUR5 198 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 BTBD1Q9H0C5 482 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 AHSPQ9NZD4 102 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 LIMD1Q9UGP4 676 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 OAZ3Q9UMX2 235 aa18.67■□□□□ 0.58
HOXC4-201ENST00000303406 TDRKHQ9Y2W6 561 aaKnown RBP18.67■□□□□ 0.58
HOXC4-201ENST00000303406 GNG14A0A1W2PPG7 69 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 CACNB4O00305 520 aaPredicted RBP18.66■□□□□ 0.58
HOXC4-201ENST00000303406 CCNDBP1O95273 360 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 KLF8O95600 359 aaPredicted RBP18.66■□□□□ 0.58
HOXC4-201ENST00000303406 GSNP06396 782 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 ABCB1P08183 1280 aaPredicted RBP18.66■□□□□ 0.58
HOXC4-201ENST00000303406 COL9A1P20849 921 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 KIAA1024LP59773 190 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 PON2Q15165 354 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 HKDC1Q2TB90 917 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 PYCR3Q53H96 274 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 OR4K1Q8NGD4 311 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 DNASE1L2Q92874 299 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 SLC47A1Q96FL8 570 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 SPNS1Q9H2V7 528 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 CD320Q9NPF0 282 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 ZNF282Q9UDV7 671 aaPredicted RBP18.66■□□□□ 0.58
HOXC4-201ENST00000303406 PLAGL1Q9UM63 463 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 NCKAP1Q9Y2A7 1128 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 CROCCQ5TZA2 2017 aa18.66■□□□□ 0.58
HOXC4-201ENST00000303406 LAMA2P24043 3122 aaKnown RBP18.66■□□□□ 0.58
HOXC4-201ENST00000303406 RNF103-CHMP3A0A140T963 221 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 DLGAP1O14490 977 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 ENGP17813 658 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms