RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 RPL10P27635 214 aaKnown RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 SLC7A1P30825 629 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 TIA1P31483 386 aaKnown RBP eCLIP11.54□□□□□ -0.56
TPM3-202ENST00000302206 MSX2P35548 267 aaPredicted RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 RABIFP47224 123 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 CLDN2P57739 230 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 RAE1P78406 368 aaKnown RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 ABATP80404 500 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 MRPS22P82650 360 aaKnown RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 REEP5Q00765 189 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 LRRC74AQ0VAA2 488 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 TSTA3Q13630 321 aaPredicted RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 DDX39BQ13838 428 aaKnown RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 CLCA4Q14CN2 919 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 RUNDC3AQ59EK9 446 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 ENPP7Q6UWV6 458 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 RNF111Q6ZNA4 994 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 PROSER1Q86XN7 944 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 METTL4Q8N3J2 472 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 CATSPER1Q8NEC5 780 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 TNIP2Q8NFZ5 429 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 OR8J2Q8NGG1 315 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 HMGB4Q8WW32 186 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 TSSK3Q96PN8 268 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 KCTD14Q9BQ13 255 aaPredicted RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 TACO1Q9BSH4 297 aaKnown RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 EFHD1Q9BUP0 239 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 PAIP1Q9H074 479 aaKnown RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 PCDHAC1Q9H158 963 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 CHRDQ9H2X0 955 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 ALG2Q9H553 416 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 CD93Q9NPY3 652 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 FAM120CQ9NX05 1096 aaKnown RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 TRNAU1APQ9NX07 287 aaKnown RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 SLAMF8Q9P0V8 285 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 TAC3Q9UHF0 121 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 MOSPD1Q9UJG1 213 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 WBP11Q9Y2W2 641 aaKnown RBP11.54□□□□□ -0.56
TPM3-202ENST00000302206 PLEKHM1Q9Y4G2 1056 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 NEUROG3Q9Y4Z2 214 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 PCDHB3Q9Y5E6 796 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 PCDHB11Q9Y5F2 797 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 DGKBQ9Y6T7 804 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 COLEC10Q9Y6Z7 277 aa11.54□□□□□ -0.56
TPM3-202ENST00000302206 EPG5Q9HCE0 2579 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 PDZK1P1A8MUH7 402 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 ZNF217O75362 1048 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 CCNDBP1O95273 360 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 ETHE1O95571 254 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 GPIP06744 558 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 UMPSP11172 480 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 ACADSP16219 412 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 HOXB9P17482 250 aaPredicted RBP11.53□□□□□ -0.56
TPM3-202ENST00000302206 HRH2P25021 359 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 GSTM2P28161 218 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 HPCAL1P37235 193 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 RPL3P39023 403 aaKnown RBP11.53□□□□□ -0.56
TPM3-202ENST00000302206 KIR3DL1P43629 444 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 SRP54P61011 504 aaKnown RBP11.53□□□□□ -0.56
TPM3-202ENST00000302206 PRDX1Q06830 199 aaKnown RBP11.53□□□□□ -0.56
TPM3-202ENST00000302206 MAP7Q14244 749 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 KRT33BQ14525 404 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 PUM1Q14671 1186 aaKnown RBP eCLIP11.53□□□□□ -0.566e-14■■□□□ 12.1
TPM3-202ENST00000302206 MUM1Q2TAK8 710 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 MTX3Q5HYI7 312 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 RABL3Q5HYI8 236 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 DUS1LQ6P1R4 473 aaKnown RBP11.53□□□□□ -0.56
TPM3-202ENST00000302206 GPR180Q86V85 440 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 TMEM132CQ8N3T6 1108 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 RNF175Q8N4F7 328 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 C1orf52Q8N6N3 182 aaKnown RBP11.53□□□□□ -0.56
TPM3-202ENST00000302206 LINC01555Q8NAE3 123 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 CLHC1Q8NHS4 586 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 ZFPM2Q8WW38 1151 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 DNAJC9Q8WXX5 260 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 NELL1Q92832 810 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 POP5Q969H6 163 aaKnown RBP11.53□□□□□ -0.56
TPM3-202ENST00000302206 SH3KBP1Q96B97 665 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 COQ8BQ96D53 544 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 SHDQ96IW2 340 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 PPM1MQ96MI6 270 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 CCDC115Q96NT0 180 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 NELL2Q99435 816 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 MYOCQ99972 504 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 LMAN1LQ9HAT1 526 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 SERHLQ9NQF3 203 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 IMP3Q9NV31 184 aaKnown RBP11.53□□□□□ -0.56
TPM3-202ENST00000302206 ARMC1Q9NVT9 282 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 AHSPQ9NZD4 102 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 ATP6V1HQ9UI12 483 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 MAGEL2Q9UJ55 1249 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 AP4S1Q9Y587 144 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 CFAP20Q9Y6A4 193 aaKnown RBP11.53□□□□□ -0.56
TPM3-202ENST00000302206 F5P12259 2224 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 ATG2BQ96BY7 2078 aa11.53□□□□□ -0.56
TPM3-202ENST00000302206 EP300Q09472 2414 aaPredicted RBP11.52□□□□□ -0.56
TPM3-202ENST00000302206 ZNF292O60281 2723 aa11.52□□□□□ -0.56
TPM3-202ENST00000302206 DMXL1Q9Y485 3027 aa11.52□□□□□ -0.56
TPM3-202ENST00000302206 DOCK9Q9BZ29 2069 aa11.52□□□□□ -0.57
TPM3-202ENST00000302206 SCAMP2O15127 329 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms