RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CSTF3Q12996 717 aaKnown RBP14.03□□□□□ -0.16
SMG8-201ENST00000300917 KCNC3Q14003 757 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 IRF4Q15306 451 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 DUOXA1Q1HG43 343 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 BCL7AQ4VC05 210 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 FKBP9P1Q75LS8 142 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 HM13Q8TCT9 377 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 HCAR2Q8TDS4 363 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 MUC13Q9H3R2 512 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 AASDHPPTQ9NRN7 309 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 ASIC5Q9NY37 505 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 SMPD3Q9NY59 655 aaPredicted RBP14.03□□□□□ -0.16
SMG8-201ENST00000300917 PLXNA2O75051 1894 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 TBC1D3DA0A087WVF3 549 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TBC1D3IA0A087WXS9 549 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TBC1D3EA0A087X179 549 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TBC1D3KA0A087X1G2 549 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TBC1D3FA6NER0 549 aaPredicted RBP14.02□□□□□ -0.16
SMG8-201ENST00000300917 TBC1D3LB9A6J9 549 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 OPN1SWP03999 348 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TBC1D3HP0C7X1 549 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 C1GALT1C1LP0DN25 315 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 ALDH9A1P49189 494 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TAS2R50P59544 299 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 ITPRIPL2Q3MIP1 535 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 PRAMEF14Q5SWL7 426 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.02□□□□□ -0.16
SMG8-201ENST00000300917 PRAMEF13Q5VWM6 474 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 FAM46CQ5VWP2 391 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TBC1D3GQ6DHY5 549 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TBC1D3CQ6IPX1 549 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 GALNT5Q7Z7M9 940 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TMEM179BQ7Z7N9 219 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 LRRTM4Q86VH4 590 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 RASGRP3Q8IV61 690 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TBC1D3Q8IZP1 549 aaPredicted RBP14.02□□□□□ -0.16
SMG8-201ENST00000300917 EZH1Q92800 747 aaPredicted RBP14.02□□□□□ -0.16
SMG8-201ENST00000300917 LMCD1Q9NZU5 365 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 MYRFQ9Y2G1 1151 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 TMED5Q9Y3A6 229 aa14.02□□□□□ -0.16
SMG8-201ENST00000300917 PTGER1P34995 402 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 POLR2IP36954 125 aaKnown RBP14.02□□□□□ -0.17
SMG8-201ENST00000300917 FCHO2Q0JRZ9 810 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 C2orf80Q0P641 193 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 GAB1Q13480 694 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.02□□□□□ -0.17
SMG8-201ENST00000300917 TMEM52BQ4KMG9 183 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 INTS11Q5TA45 600 aaKnown RBP14.02□□□□□ -0.17
SMG8-201ENST00000300917 TESCQ96BS2 214 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 UGT2B28Q9BY64 529 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 OR52A5Q9H2C5 316 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 WDR26Q9H7D7 661 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 ZFR2Q9UPR6 939 aaKnown RBP14.02□□□□□ -0.17
SMG8-201ENST00000300917 KLHL20Q9Y2M5 609 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 GPSM3Q9Y4H4 160 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 PDZK1P1A8MUH7 402 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 H3BSA7 217 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 UPK1AO00322 258 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 H6PDO95479 791 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 LAMP2P13473 410 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 TNFRSF1BP20333 461 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 ACADLP28330 430 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 TXNL4AP83876 142 aaKnown RBP14.02□□□□□ -0.17
SMG8-201ENST00000300917 SMU1Q2TAY7 513 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 ZNF658BQ4V348 819 aaPredicted RBP14.02□□□□□ -0.17
SMG8-201ENST00000300917 ZDHHC13Q8IUH4 622 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 OR4A15Q8NGL6 344 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 C12orf66Q96MD2 445 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 FERD3LQ96RJ6 166 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 BARD1Q99728 777 aaKnown RBP14.02□□□□□ -0.17
SMG8-201ENST00000300917 TPT1P8Q9HAU6 139 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 CLDND1Q9NY35 253 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 MSRAQ9UJ68 235 aa14.02□□□□□ -0.17
SMG8-201ENST00000300917 KIF26AQ9ULI4 1882 aaPredicted RBP14.02□□□□□ -0.17
SMG8-201ENST00000300917 A0A1W2PQU0 124 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 G3V2T6 193 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 SCAMP2O15127 329 aaKnown RBP14.01□□□□□ -0.17
SMG8-201ENST00000300917 PPM1DO15297 605 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 HS6ST1O60243 411 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 ALBP02768 609 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 ACPPP15309 386 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 ELK4P28324 431 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 SOAT1P35610 550 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 CRATP43155 626 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 RPL5P46777 297 aaKnown RBP14.01□□□□□ -0.17
SMG8-201ENST00000300917 CLDN2P57739 230 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 DPTQ07507 201 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 SGCGQ13326 291 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 KRT33BQ14525 404 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 NXPE4Q6UWF7 544 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 CHCHD4Q8N4Q1 142 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 RAD51AP1Q96B01 352 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 MUS81Q96NY9 551 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 F2RL3Q96RI0 385 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 AASSQ9UDR5 926 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 GRXCR2A6NFK2 248 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 SCN2BO60939 215 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 C6orf47O95873 294 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 CYP4B1P13584 511 aa14.01□□□□□ -0.17
SMG8-201ENST00000300917 CD72P21854 359 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms