RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 OR1F1O43749 312 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ATG13O75143 517 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CCNB2O95067 398 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 MATN4O95460 622 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 KLKB1P03952 638 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CRHBPP24387 322 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 HRH2P25021 359 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CDKN2CP42773 168 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 TMBIM6P55061 237 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 OR2B6P58173 313 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 SRSF11Q05519 484 aaKnown RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 DUOXA1Q1HG43 343 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CTSL3PQ5NE16 218 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 DCST1Q5T197 706 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 NPAS4Q8IUM7 802 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 RAD51AP1Q96B01 352 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ZNF347Q96SE7 839 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 IGFLR1Q9H665 355 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ZDHHC3Q9NYG2 299 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 TMEM98Q9Y2Y6 226 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 PCDHA9Q9Y5H5 950 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 KIAA1217Q5T5P2 1943 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ISM1B1AKI9 464 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 E2F3O00716 465 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 EBLN1P0CF75 366 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ITGA2P17301 1181 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 MASP1P48740 699 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CD300CQ08708 224 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 NPRL3Q12980 569 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 KRR1Q13601 381 aaKnown RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 UGT3A2Q3SY77 523 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ANXA8L1Q5VT79 327 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 DUS1LQ6P1R4 473 aaKnown RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 ASB18Q6ZVZ8 466 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 HMGCLL1Q8TB92 370 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 GTF2H4Q92759 462 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 TMEM121BQ9BXQ6 578 aaPredicted RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 OR51E2Q9H255 320 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 SERHL2Q9H4I8 314 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 SERHLQ9NQF3 203 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 IL17CQ9P0M4 197 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ZNF222Q9UK12 451 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 DLEC1Q9Y238 1755 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 LOC285095A0A1B0GVY8 99 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ZNF623O75123 536 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 UGT2B17O75795 530 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 C8AP07357 584 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CCR4P51679 360 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CDK6Q00534 326 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CREMQ03060 361 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 PYCR3Q53H96 274 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 HACD2Q6Y1H2 254 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 BTLAQ7Z6A9 289 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 SLC5A8Q8N695 610 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 BIRC8Q96P09 236 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 TRNT1Q96Q11 434 aaKnown RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 GAL3ST1Q99999 423 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ITPAQ9BY32 194 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CDV3Q9UKY7 258 aaKnown RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 AP3M1Q9Y2T2 418 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 H0YAE9 185 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 CD70P32970 193 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 HMGCLP35914 325 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 MAPK8P45983 427 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 DOC2AQ14183 400 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 ARHGEF6Q15052 776 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 MPPE1Q53F39 396 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 CEACAM20Q6UY09 585 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 C16orf62Q7Z3J2 963 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 NAGSQ8N159 534 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 TCAIMQ8N3R3 496 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 CHST14Q8NCH0 376 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 PDPRQ8NCN5 879 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 ACPTQ9BZG2 426 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 CRNNQ9UBG3 495 aaPredicted RBP12.87□□□□□ -0.35
CASC4-201ENST00000299957 ITM2BQ9Y287 266 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 MRPS23Q9Y3D9 190 aaKnown RBP12.87□□□□□ -0.35
CASC4-201ENST00000299957 NPIPB15A6NHN6 443 aaPredicted RBP12.87□□□□□ -0.35
CASC4-201ENST00000299957 B4GALT3O60512 393 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 ALPLP05186 524 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 ALOX5P09917 674 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 HOXD9P28356 352 aaPredicted RBP12.87□□□□□ -0.35
CASC4-201ENST00000299957 EPHA2P29317 976 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 AVPR1BP47901 424 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 LIPKQ5VXJ0 399 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 TMEM53Q6P2H8 277 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 SPATC1Q76KD6 591 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 C17orf64Q86WR6 236 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 TMEM151AQ8N4L1 468 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 GPR26Q8NDV2 337 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 SORBS1Q9BX66 1292 aaKnown RBP12.87□□□□□ -0.35
CASC4-201ENST00000299957 ZCCHC3Q9NUD5 404 aaKnown RBP12.87□□□□□ -0.35
CASC4-201ENST00000299957 KLHL28Q9NXS3 571 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 TMEM9Q9P0T7 183 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 GPSM3Q9Y4H4 160 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 ACOX3O15254 700 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 LATO43561 262 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms