RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TLX2O43763 284 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 POP7O75817 140 aaKnown RBP13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 VNN2O95498 520 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 HCKP08631 526 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ITGA5P08648 1049 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GLB1L3Q8NCI6 653 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 HSH2DQ96JZ2 352 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PRORSD1PA6NEY8 169 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MANBAO00462 879 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 H1F0P07305 194 aaKnown RBP13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 UQCRC1P31930 480 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NRIP1P48552 1158 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RABL3Q5HYI8 236 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FRG2Q64ET8 278 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SYCE2Q6PIF2 218 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FOXR2Q6PJQ5 311 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLITRK4Q8IW52 837 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FRG2BQ96QU4 278 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 WACQ9BTA9 647 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PAK6Q9NQU5 681 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 POLE4Q9NR33 117 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MEN1O00255 615 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 IL33O95760 270 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DSG2Q14126 1118 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MYLK3Q32MK0 819 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TMEM236Q5W0B7 351 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 LRRTM4Q86VH4 590 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SUN5Q8TC36 379 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CNDP2Q96KP4 475 aaKnown RBP13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FBXL18Q96ME1 805 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PRICKLE1Q96MT3 831 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MYO5BQ9ULV0 1848 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GNSP15586 552 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PRPS1L1P21108 318 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PHC1P78364 1004 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PIGFQ07326 219 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GPALPP1Q8IXQ4 340 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SYNPOQ8N3V7 929 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MSL3Q8N5Y2 521 aaKnown RBP13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RAB8BQ92930 207 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC7A6OSQ96CW6 309 aaPredicted RBP13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MSLNLQ96KJ4 702 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CGREF1Q99674 301 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 XKR8Q9H6D3 395 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 A0A1W2PPK0 400 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FPGSQ05932 587 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 KCNJ11Q14654 390 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ADGRF1Q5T601 910 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NOXRED1Q6NXP6 359 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC22A16Q86VW1 577 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TOMM5Q8N4H5 51 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 THAP3Q8WTV1 239 aaPredicted RBP13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZNF350Q9GZX5 532 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ITGA10O75578 1167 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZBTB48P10074 688 aaPredicted RBP13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ELK4P28324 431 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ARHGAP1Q07960 439 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CARD17Q5XLA6 110 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NPLOC4Q8TAT6 608 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 HSD3B7Q9H2F3 369 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 METTL7AQ9H8H3 244 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DMAC2Q9NW81 257 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CYTH4Q9UIA0 394 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 YARS2Q9Y2Z4 477 aaKnown RBP13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 KANTRA0A1W2PQU2 76 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 BPNT1O95861 308 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ITIH1P19827 911 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ATP5A1P25705 553 aaKnown RBP13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PRRT3Q5FWE3 981 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PYHIN1Q6K0P9 492 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PXYLP1Q8TE99 480 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZDHHC4Q9NPG8 344 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 C11orf98E9PRG8 122 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 XPNPEP2O43895 674 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TYRP14679 529 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SETD7Q8WTS6 366 aaKnown RBP13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZNF641Q96N77 438 aaPredicted RBP13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 C11orf49Q9H6J7 331 aa13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ATXN7L1Q9ULK2 861 aaPredicted RBP13.18□□□□□ -0.3
CHRFAM7A-201ENST00000299847 HOXB6P17509 224 aaKnown RBP13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SSX6Q7RTT6 188 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 C2orf15Q8WU43 125 aaKnown RBP13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RAB2BQ8WUD1 216 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GEMIN6Q8WXD5 167 aaKnown RBP13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NXPE2Q96DL1 559 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CMTM7Q96FZ5 175 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NDC1Q9BTX1 674 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DCSTAMPQ9H295 470 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ST6GALNAC4Q9H4F1 302 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TREM1Q9NP99 234 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FKBP14Q9NWM8 211 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MLXQ9UH92 298 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NOX1Q9Y5S8 564 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 WASH3PC4AMC7 463 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PLD2O14939 933 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 VAMP1P23763 118 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 BLKP51451 505 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PLEKHG6Q3KR16 790 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms