RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 DOLKQ9UPQ8 538 aa13.22□□□□□ -0.29
NCSTN-201ENST00000294785 DIRAS1O95057 198 aa13.21□□□□□ -0.29
NCSTN-201ENST00000294785 CYP2A6P11509 494 aaPredicted RBP13.21□□□□□ -0.29
NCSTN-201ENST00000294785 FSHRP23945 695 aa13.21□□□□□ -0.29
NCSTN-201ENST00000294785 PTX3P26022 381 aaPredicted RBP13.21□□□□□ -0.29
NCSTN-201ENST00000294785 KCNJ10P78508 379 aa13.21□□□□□ -0.29
NCSTN-201ENST00000294785 CYP4F8P98187 520 aa13.21□□□□□ -0.29
NCSTN-201ENST00000294785 SPIN4Q56A73 249 aa13.21□□□□□ -0.29
NCSTN-201ENST00000294785 SPOUT1Q5T280 376 aaKnown RBP13.21□□□□□ -0.29
NCSTN-201ENST00000294785 CPTPQ5TA50 214 aa13.21□□□□□ -0.29
NCSTN-201ENST00000294785 PDE12Q6L8Q7 609 aaKnown RBP13.21□□□□□ -0.29
NCSTN-201ENST00000294785 CLECL1Q8IZS7 167 aa13.21□□□□□ -0.29
NCSTN-201ENST00000294785 RAD18Q9NS91 495 aa13.21□□□□□ -0.29
NCSTN-201ENST00000294785 PLCXD1Q9NUJ7 323 aa13.21□□□□□ -0.29
NCSTN-201ENST00000294785 NFKBIL1Q9UBC1 381 aaPredicted RBP13.21□□□□□ -0.29
NCSTN-201ENST00000294785 ZNF282Q9UDV7 671 aaPredicted RBP13.21□□□□□ -0.29
NCSTN-201ENST00000294785 HELZP42694 1942 aaKnown RBP13.21□□□□□ -0.29
NCSTN-201ENST00000294785 AXIN1O15169 862 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 MAN1A2O60476 641 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 WBP4O75554 376 aaKnown RBP13.21□□□□□ -0.3
NCSTN-201ENST00000294785 LAMP1P11279 417 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 PNLIPRP1P54315 467 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 VBP1P61758 197 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 TUBA1BP68363 451 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 TEKQ02763 1124 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 DOC2AQ14183 400 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 ELOAQ14241 798 aaKnown RBP13.21□□□□□ -0.3
NCSTN-201ENST00000294785 BRAT1Q6PJG6 821 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 SERPINA13PQ6UXR4 307 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 DPY19L3Q6ZPD9 716 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 TUBA1AQ71U36 451 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 NPAS3Q8IXF0 933 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 SH3KBP1Q96B97 665 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 LGALS12Q96DT0 336 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 DPH2Q9BQC3 489 aaPredicted RBP13.21□□□□□ -0.3
NCSTN-201ENST00000294785 DOHHQ9BU89 302 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 ITPAQ9BY32 194 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 TRNAU1APQ9NX07 287 aaKnown RBP13.21□□□□□ -0.3
NCSTN-201ENST00000294785 ERVK-11Q9UQG0 969 aa13.21□□□□□ -0.3
NCSTN-201ENST00000294785 TRAV19A0A0A6YYK7 116 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 CARNS1A5YM72 827 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 WASH3PC4AMC7 463 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 ADAMDEC1O15204 470 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 HLA-FP30511 346 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 ELP6Q0PNE2 266 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 RGNQ15493 299 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 INAQ16352 499 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.2□□□□□ -0.38e-8■■■□□ 15.4
NCSTN-201ENST00000294785 GAREM2Q75VX8 874 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 BTLAQ7Z6A9 289 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 CCDC71Q8IV32 467 aaPredicted RBP13.2□□□□□ -0.3
NCSTN-201ENST00000294785 P3H2Q8IVL5 708 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 ENTHD1Q8IYW4 607 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 COQ8BQ96D53 544 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 TPD52L3Q96J77 140 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 MTERF1Q99551 399 aaKnown RBP13.2□□□□□ -0.3
NCSTN-201ENST00000294785 FAM83DQ9H4H8 585 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 PCDH12Q9NPG4 1184 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 VPS4AQ9UN37 437 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 E7EQ34 232 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 BNIP3LO60238 219 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 PCDHGA12O60330 932 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 TGFBR2P37173 567 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 DGCR6Q14129 220 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 SMN1Q16637 294 aaKnown RBP13.2□□□□□ -0.3
NCSTN-201ENST00000294785 GDPD4Q6W3E5 623 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 GALNT10Q86SR1 603 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 RNF175Q8N4F7 328 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 C11orf65Q8NCR3 313 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 APH1BQ8WW43 257 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 PSD2Q9BQI7 771 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 BBS2Q9BXC9 721 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.2□□□□□ -0.3
NCSTN-201ENST00000294785 OSGIN1Q9UJX0 560 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 PCDHGA6Q9Y5G7 932 aa13.2□□□□□ -0.3
NCSTN-201ENST00000294785 KRBA1A5PL33 1030 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 GABRR3A8MPY1 467 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 A8MVJ9 347 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 ARHGEF33A8MVX0 844 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 RNASET2O00584 256 aaKnown RBP13.19□□□□□ -0.3
NCSTN-201ENST00000294785 SGTAO43765 313 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 GNRH1P01148 92 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 C1QCP02747 245 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 EPHA2P29317 976 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 VIPR1P32241 457 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 UGT2B10P36537 528 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 MAGEA8P43361 318 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 RPS3AP61247 264 aaKnown RBP13.19□□□□□ -0.3
NCSTN-201ENST00000294785 CREMQ03060 361 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 E2F2Q14209 437 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 TBCEQ15813 527 aaPredicted RBP13.19□□□□□ -0.3
NCSTN-201ENST00000294785 HKDC1Q2TB90 917 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 C10orf62Q5T681 223 aaPredicted RBP13.19□□□□□ -0.3
NCSTN-201ENST00000294785 AGTRAPQ6RW13 159 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 DDX53Q86TM3 631 aaKnown RBP13.19□□□□□ -0.3
NCSTN-201ENST00000294785 TRAM1L1Q8N609 369 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 SLC38A4Q969I6 547 aa13.19□□□□□ -0.3
NCSTN-201ENST00000294785 SLIRPQ9GZT3 109 aaKnown RBP13.19□□□□□ -0.3
NCSTN-201ENST00000294785 RUBCNLQ9H714 662 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms