RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 RICTORQ6R327 1708 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 K7EPI3 171 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 HADHBP55084 474 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF280AP59817 542 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 RPL6Q02878 288 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SPIN3Q5JUX0 258 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 REEP3Q6NUK4 255 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 LINGO4Q6UY18 593 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GID4Q8IVV7 300 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SPATA22Q8NHS9 363 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 MAPK15Q8TD08 544 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SLC5A11Q8WWX8 675 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TFGQ92734 400 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SLC35A5Q9BS91 424 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TMEM109Q9BVC6 243 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 MND1Q9BWT6 205 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 HIPK2Q9H2X6 1198 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 C8orf33Q9H7E9 229 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 FBRSL1Q9HCM7 1045 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 KLHL13Q9P2N7 655 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 EIF2B4Q9UI10 523 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 PCDHB14Q9Y5E9 798 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 PCDHGC4Q9Y5F7 938 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ATRNL1Q5VV63 1379 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 C5orf51A6NDU8 294 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 CCNKO75909 580 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ACTL6BO94805 426 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GSRP00390 522 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GNAO1P09471 354 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ATF4P18848 351 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TCEA1P23193 301 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 RAB28P51157 221 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 DCDC1P59894 354 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 MPP1Q00013 466 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 FADDQ13158 208 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 UBAP2LQ14157 1087 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GNMTQ14749 295 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF792Q3KQV3 632 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GDPD4Q6W3E5 623 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF852Q6ZMS4 543 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GALNT12Q8IXK2 581 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TOMM5Q8N4H5 51 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 OR52E4Q8NGH9 312 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 OSTF1Q92882 214 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 MR1Q95460 341 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 HSPA12BQ96MM6 686 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 HERPUD2Q9BSE4 406 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ABCG8Q9H221 673 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 CHRAC1Q9NRG0 131 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 KCND1Q9NSA2 647 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 PAK1IP1Q9NWT1 392 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 OSER1Q9NX31 292 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SRPK3Q9UPE1 567 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 INSL5Q9Y5Q6 135 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ACACAQ13085 2346 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 DPPA5A6NC42 116 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 EFCAB7A8K855 629 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF878C9JN71 531 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GPR25O00155 361 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 IFNA2P01563 188 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 HEXBP07686 556 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 VAMP1P23763 118 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MARCKSL1P49006 195 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 HNRNPKP61978 463 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 LSM3P62310 102 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CYP4F8P98187 520 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PLCXD2Q0VAA5 305 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ECH1Q13011 328 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GRM2Q14416 872 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF829Q3KNS6 432 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 RBM48Q5RL73 367 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PERM1Q5SV97 790 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 OGFRL1Q5TC84 451 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 KIAA1161Q6NSJ0 714 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 IQCHQ86VS3 1027 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 OR5K1Q8NHB7 308 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PROKR1Q8TCW9 393 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZC3H10Q96K80 434 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 VRK1Q99986 396 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CADM1Q9BY67 442 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CCDC86Q9H6F5 360 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SPATA6Q9NWH7 488 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 UTS2RQ9UKP6 389 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MICAL3Q7RTP6 2002 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PHYHO14832 338 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 FFAR2O15552 330 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ENTPD6O75354 484 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 THBS2P35442 1172 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CDKN1CP49918 316 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 RORCP51449 518 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 RPS21P63220 83 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TUBA1BP68363 451 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ELF3P78545 371 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 DMWDQ09019 674 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 KLF10Q13118 480 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TCTE1Q5JU00 501 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MTFR2Q6P444 385 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TUBA1AQ71U36 451 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SATL1Q86VE3 508 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 NXPE1Q8N323 547 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms