RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 POLE2P56282 527 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 HIST2H2ACQ16777 129 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-201ENST00000279247 CPTPQ5TA50 214 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 HIST2H2AA3Q6FI13 130 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 COMMD6Q7Z4G1 85 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 TBC1D21Q8IYX1 336 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 FBXL20Q96IG2 436 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 PRAP1Q96NZ9 151 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 SH3GL1Q99961 368 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 CPPED1Q9BRF8 314 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-201ENST00000279247 DPEP2Q9H4A9 486 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 PDP2Q9P2J9 529 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 MTCH2Q9Y6C9 303 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 HEATR5BQ9P2D3 2071 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 TICRRQ7Z2Z1 1910 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 A0A096LPI6 279 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 CLIC1O00299 241 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 MTHFRP42898 656 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 SDE2Q6IQ49 451 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 ADAMTSL4Q6UY14 1074 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 RNF165Q6ZSG1 346 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 STK32CQ86UX6 486 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 SATL1Q86VE3 508 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 MUC13Q9H3R2 512 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 ITM2CQ9NQX7 267 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 TMEM45AQ9NWC5 275 aa17.27■□□□□ 0.35
CAPN1-201ENST00000279247 C17orf113A0A1B0GUU1 675 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 EVPLLA8MZ36 301 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 H0Y8X5 98 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 ANKRD34AQ69YU3 496 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 NXPE4Q6UWF7 544 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 KIAA1324Q6UXG2 1013 aaKnown RBP17.26■□□□□ 0.35
CAPN1-201ENST00000279247 IL17RCQ8NAC3 791 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 TESCQ96BS2 214 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 GRIP2Q9C0E4 1043 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 GRXCR2A6NFK2 248 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 CREG1O75629 220 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 ADH1BP00325 375 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 NTSR1P30989 418 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 HSPA13P48723 471 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 PPP2CBP62714 309 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 PPP2CAP67775 309 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 TFF2Q03403 129 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 LAPTM4AQ15012 233 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 SKIV2LQ15477 1246 aaKnown RBP17.26■□□□□ 0.35
CAPN1-201ENST00000279247 PPP4R4Q6NUP7 873 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 DCUN1D3Q8IWE4 304 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 KIAA1958Q8N8K9 716 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 SLC47A1Q96FL8 570 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 TMEM121BQ9BXQ6 578 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-201ENST00000279247 SLC17A9Q9BYT1 436 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 RNGTTO60942 597 aaKnown RBP17.26■□□□□ 0.35
CAPN1-201ENST00000279247 OR6B1O95007 311 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 SNAP29O95721 258 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 NUDT7P0C024 238 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 WNT3P56703 355 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 VAC14Q08AM6 782 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 SPIDRQ14159 915 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 PAGE2BQ5JRK9 111 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 MAL2Q969L2 176 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 TMBIM1Q969X1 311 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 CIDECQ96AQ7 238 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-201ENST00000279247 LINC00615Q96LM1 132 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-201ENST00000279247 MACROD1Q9BQ69 325 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 C9orf16Q9BUW7 83 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 SGPP1Q9BX95 441 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 OSBPL11Q9BXB4 747 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 DMRT3Q9NQL9 472 aa17.26■□□□□ 0.35
CAPN1-201ENST00000279247 PHPT1Q9NRX4 125 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-201ENST00000279247 CCDC160A6NGH7 325 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 CLOCKO15516 846 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 PI15O43692 258 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 ADAM23O75077 832 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 DIRAS1O95057 198 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 EPN2O95208 641 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 CST1P01037 141 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 KELP23276 732 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 PRPH2P23942 346 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 PTPN6P29350 595 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 TIA1P31483 386 aaKnown RBP eCLIP17.25■□□□□ 0.351e-10■□□□□ 11.1
CAPN1-201ENST00000279247 CTHP32929 405 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 TAS2R50P59544 299 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 DUOXA1Q1HG43 343 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 ZNF385BQ569K4 471 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 TMIGD1Q6UXZ0 262 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 OR5AK3PQ8NH89 298 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 LAMA1P25391 3075 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 TRBV5-3A0A0A0MS03 114 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 SOX1O00570 391 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-201ENST00000279247 FCGR1AP12314 374 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 EIF2DP41214 584 aaKnown RBP17.25■□□□□ 0.35
CAPN1-201ENST00000279247 PLCL1Q15111 1095 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 PRR23BQ6ZRT6 265 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 C17orf64Q86WR6 236 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 FAM9CQ8IZT9 166 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 RIPOR3Q96MK2 946 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 EFCAB11Q9BUY7 163 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 RAPGEFL1Q9UHV5 662 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 ACSL6Q9UKU0 697 aa17.25■□□□□ 0.35
CAPN1-201ENST00000279247 COLQQ9Y215 455 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms