RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 Q0VFX4 171 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 UBAP2LQ14157 1087 aaKnown RBP13.7□□□□□ -0.22
HMGN3-201ENST00000275036 MYBPC3Q14896 1274 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 CAPN13Q6MZZ7 669 aaPredicted RBP13.7□□□□□ -0.22
HMGN3-201ENST00000275036 NKAPQ8N5F7 415 aaKnown RBP13.7□□□□□ -0.22
HMGN3-201ENST00000275036 AMER2Q8N7J2 671 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 CLEC1AQ8NC01 280 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 NACC2Q96BF6 587 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 MIEF2Q96C03 454 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 TM4SF19Q96DZ7 209 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 MVB12AQ96EY5 273 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 MMABQ96EY8 250 aaPredicted RBP13.7□□□□□ -0.22
HMGN3-201ENST00000275036 CRB3Q9BUF7 120 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 UNKQ9C0B0 810 aaKnown RBP13.7□□□□□ -0.22
HMGN3-201ENST00000275036 DRC3Q9H069 523 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 RAB17Q9H0T7 212 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 SPNS1Q9H2V7 528 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 SEMA3GQ9NS98 782 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 TRPC4Q9UBN4 977 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 NOVA2Q9UNW9 492 aaKnown RBP13.7□□□□□ -0.22
HMGN3-201ENST00000275036 CSAG2Q9Y5P2 127 aa13.7□□□□□ -0.22
HMGN3-201ENST00000275036 ESPL1Q14674 2120 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 ESYT3A0FGR9 886 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 TXNDC9O14530 226 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 MAT1AQ00266 395 aaKnown RBP13.69□□□□□ -0.22
HMGN3-201ENST00000275036 OCA2Q04671 838 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 FAM53BQ14153 422 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 INPP5JQ15735 1006 aaPredicted RBP13.69□□□□□ -0.22
HMGN3-201ENST00000275036 RBBP7Q16576 425 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 PLEKHN1Q494U1 663 aaPredicted RBP13.69□□□□□ -0.22
HMGN3-201ENST00000275036 CATSPEREQ5SY80 951 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 C3orf62Q6ZUJ4 267 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 CYS1Q717R9 158 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 CCDC25Q86WR0 208 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 ZNF740Q8NDX6 193 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 ABHD11Q8NFV4 315 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 OR11G2Q8NGC1 345 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 OR4K1Q8NGD4 311 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 OR9A4Q8NGU2 314 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 PNPLA2Q96AD5 504 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 C8orf44Q96CB5 159 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 C19orf60Q96EN9 201 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 RBBP8Q99708 897 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 HAUS8Q9BT25 410 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 LRRC1Q9BTT6 524 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 TRIM54Q9BYV2 358 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 PHACTR1Q9C0D0 580 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 LRRC4CQ9HCJ2 640 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 GPAMQ9HCL2 828 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 ATP13A2Q9NQ11 1180 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 C5AR2Q9P296 337 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 C3orf18Q9UK00 162 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 CDC14AQ9UNH5 594 aa13.69□□□□□ -0.22
HMGN3-201ENST00000275036 CPAMD8Q8IZJ3 1885 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 CTAGE15A4D2H0 777 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 PHGDHO43175 533 aaKnown RBP13.68□□□□□ -0.22
HMGN3-201ENST00000275036 FAM155BO75949 473 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 IGHEP01854 428 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 GMPRP36959 345 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 MAGEA4P43358 317 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 POU4F1Q01851 419 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 GUCY2DQ02846 1103 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 CAV1Q03135 178 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 AIMP2Q13155 320 aaKnown RBP13.68□□□□□ -0.22
HMGN3-201ENST00000275036 TSNQ15631 228 aaKnown RBP13.68□□□□□ -0.22
HMGN3-201ENST00000275036 C18orf21Q32NC0 220 aaPredicted RBP13.68□□□□□ -0.22
HMGN3-201ENST00000275036 TUBB8Q3ZCM7 444 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 KBTBD12Q3ZCT8 623 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 ATG9BQ674R7 924 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 TMEM214Q6NUQ4 689 aaKnown RBP13.68□□□□□ -0.22
HMGN3-201ENST00000275036 IGFL3Q6UXB1 125 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 CTAGE6Q86UF2 777 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 ATCAYQ86WG3 371 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 ZC3H7AQ8IWR0 971 aaKnown RBP13.68□□□□□ -0.22
HMGN3-201ENST00000275036 SPATA6LQ8N4H0 392 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 MFSD9Q8NBP5 474 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 KCT2Q8NC54 265 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 ZCCHC10Q8TBK6 192 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 ATL1Q8WXF7 558 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 ANKRD7Q92527 254 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 NEIL2Q969S2 332 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 THAP11Q96EK4 314 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 MOCOSQ96EN8 888 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 GPR22Q99680 433 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 CPNE1Q99829 537 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 SARGQ9BW04 601 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 YIPF2Q9BWQ6 316 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 POPDC3Q9HBV1 291 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 ZDHHC18Q9NUE0 388 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 OARD1Q9Y530 152 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 UTP20O75691 2785 aaKnown RBP13.68□□□□□ -0.22
HMGN3-201ENST00000275036 USP9YO00507 2555 aaPredicted RBP13.68□□□□□ -0.22
HMGN3-201ENST00000275036 HIVEP3Q5T1R4 2406 aa13.68□□□□□ -0.22
HMGN3-201ENST00000275036 SVILO95425 2214 aa13.67□□□□□ -0.22
HMGN3-201ENST00000275036 PABPN1LA6NDY0 278 aaKnown RBP13.67□□□□□ -0.22
HMGN3-201ENST00000275036 IDSB3KWA1 339 aa13.67□□□□□ -0.22
HMGN3-201ENST00000275036 TCP11X1B4DZS4 312 aa13.67□□□□□ -0.22
HMGN3-201ENST00000275036 JRKO75564 520 aa13.67□□□□□ -0.22
HMGN3-201ENST00000275036 URI1O94763 535 aaPredicted RBP13.67□□□□□ -0.22
HMGN3-201ENST00000275036 NSA2O95478 260 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms