RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PTSQ03393 145 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 MED22Q15528 200 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 DNAJB7Q7Z6W7 309 aaPredicted RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 SLC35B4Q969S0 331 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 IL4I1Q96RQ9 567 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 CLSTN3Q9BQT9 956 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 ZNF334Q9HCZ1 680 aaPredicted RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 EXOSC4Q9NPD3 245 aaKnown RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 TMEM161AQ9NX61 479 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 TMPRSS11EQ9UL52 423 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 NDRG4Q9ULP0 352 aaKnown RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 ATP11BQ9Y2G3 1177 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 GPC6Q9Y625 555 aaPredicted RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 GABRR3A8MPY1 467 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 KCNK2O95069 426 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 PABPC1P11940 636 aaKnown RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 FPR1P21462 350 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 RPS26P62854 115 aaKnown RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 ILF2Q12905 390 aaKnown RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 LMAN2Q12907 356 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 LEXMQ3ZCV2 418 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 LRIF1Q5T3J3 769 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 CCSAPQ6IQ19 270 aaPredicted RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 CAPN13Q6MZZ7 669 aaPredicted RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 OTOP2Q7RTS6 562 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 CIDECQ96AQ7 238 aaPredicted RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 TCF25Q9BQ70 676 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 TM9SF3Q9HD45 589 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 PALMDQ9NP74 551 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 H3BM21 787 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 PTGER1P34995 402 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 SPIBQ01892 262 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 ACSM2AQ08AH3 577 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 GPNMBQ14956 572 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 DUOXA1Q1HG43 343 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 TTLL9Q3SXZ7 439 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 SYT6Q5T7P8 510 aaPredicted RBP16.22■□□□□ 0.19
SQLE-201ENST00000265896 ACSM2BQ68CK6 577 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 DESI1Q6ICB0 168 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.22■□□□□ 0.19
SQLE-201ENST00000265896 PLPP6Q8IY26 295 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 OR5M11Q96RB7 305 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 KLF16Q9BXK1 252 aaPredicted RBP16.22■□□□□ 0.19
SQLE-201ENST00000265896 ABCB8Q9NUT2 735 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 FAM32AQ9Y421 112 aaKnown RBP16.22■□□□□ 0.19
SQLE-201ENST00000265896 OR2A25A4D2G3 310 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 TMEM189-UBE2V1I3L0A0 370 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 CTDSP2O14595 271 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 AP3D1O14617 1153 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 C5orf22Q49AR2 442 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 Q6ZVU0 165 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 SORBS1Q9BX66 1292 aaKnown RBP16.22■□□□□ 0.19
SQLE-201ENST00000265896 STARD7Q9NQZ5 370 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 NAALAD2Q9Y3Q0 740 aa16.22■□□□□ 0.19
SQLE-201ENST00000265896 TNFRSF11BO00300 401 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 RGS5O15539 181 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 SOX14O95416 240 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 ITGAMP11215 1152 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 CKMT1AP12532 417 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 SMARCB1Q12824 385 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 FAM124AQ86V42 546 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 MEX3DQ86XN8 651 aaKnown RBP16.21■□□□□ 0.19
SQLE-201ENST00000265896 GATAD2AQ86YP4 633 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 LYSMD2Q8IV50 215 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 VANGL1Q8TAA9 524 aaPredicted RBP16.21■□□□□ 0.19
SQLE-201ENST00000265896 B3GNT3Q9Y2A9 372 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 YIPF1Q9Y548 306 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 OR51B4Q9Y5P0 310 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 SNPHO15079 494 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 SUV39H1O43463 412 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 ZNF821O75541 412 aaPredicted RBP16.21■□□□□ 0.19
SQLE-201ENST00000265896 ANXA4P09525 319 aaPredicted RBP16.21■□□□□ 0.19
SQLE-201ENST00000265896 HLA-EP13747 358 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 PCYT1AP49585 367 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 LRRC74AQ0VAA2 488 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 DOC2AQ14183 400 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 ACOX1Q15067 660 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 Q6ZVL8 140 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 OLIG3Q7RTU3 272 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 STX19Q8N4C7 294 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 ZNF513Q8N8E2 541 aaPredicted RBP16.21■□□□□ 0.19
SQLE-201ENST00000265896 RHOXF1Q8NHV9 184 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 ADAMTS19Q8TE59 1207 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 GGHQ92820 318 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 KCTD5Q9NXV2 234 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 CFAP97Q9P2B7 532 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 BOLA1Q9Y3E2 137 aa16.21■□□□□ 0.19
SQLE-201ENST00000265896 GRXCR2A6NFK2 248 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 WWP2O00308 870 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 PCDH17O14917 1159 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 LRRTM2O43300 516 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 COQ9O75208 318 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 APOL3O95236 402 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 NSG1P42857 185 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 CSNK1DP48730 415 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 DAB2P98082 770 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 ZNF404Q494X3 552 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 ATAD3BQ5T9A4 648 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.2■□□□□ 0.185e-11■■■■■ 30.7
SQLE-201ENST00000265896 DPY19L3Q6ZPD9 716 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms