RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RPA4Q13156 261 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 ENPP7Q6UWV6 458 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 CLEC20AQ6ZU45 233 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 GALNT12Q8IXK2 581 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 OR8S1Q8NH09 359 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 BIRC7Q96CA5 298 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 CAPNS2Q96L46 248 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 PRICKLE1Q96MT3 831 aaPredicted RBP17.5■□□□□ 0.39
COL5A3-201ENST00000264828 IL12RB2Q99665 862 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 ANKHQ9HCJ1 492 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 CARD8Q9Y2G2 431 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 TRAV6A0A075B6T7 132 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 KAT7O95251 611 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 IFNA21P01568 189 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 C8orf89P0DMQ9 161 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 GDF5P43026 501 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 CDKL4Q5MAI5 379 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 NDC1Q9BTX1 674 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 DNAJC27Q9NZQ0 273 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 TAC3Q9UHF0 121 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 CSNK2A2P19784 350 aaPredicted RBP17.49■□□□□ 0.39
COL5A3-201ENST00000264828 SLC32A1Q9H598 525 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 ZDHHC3Q9NYG2 299 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 A0A0J9YVX5 310 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 GPR89AB7ZAQ6 455 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 APOL3O95236 402 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 GPR89BP0CG08 455 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 SPIN4Q56A73 249 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 NIPA2Q8N8Q9 360 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 DNAJB4Q9UDY4 337 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 FAM208AQ9UK61 1670 aaKnown RBP17.49■□□□□ 0.39
COL5A3-201ENST00000264828 FAM159BA6NKW6 160 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 B4DGG1 531 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 TMEM150CB9EJG8 249 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 MAB21L1Q13394 359 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 SGCBQ16585 318 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 XKR5Q6UX68 686 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 THOC6Q86W42 341 aaKnown RBP17.49■□□□□ 0.39
COL5A3-201ENST00000264828 ZNF227Q86WZ6 799 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 SYNPOQ8N3V7 929 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 OR52E4Q8NGH9 312 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 OR5M3Q8NGP4 307 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 OR5J2Q8NH18 312 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 DPYSL5Q9BPU6 564 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 TRIM36Q9NQ86 728 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 ZIM2Q9NZV7 527 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 LOC730098B7Z3J9 87 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 CLIC3O95833 236 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 ELK4P28324 431 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 BTBD16Q32M84 506 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 CEACAM20Q6UY09 585 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 SAMD14Q8IZD0 417 aaPredicted RBP17.49■□□□□ 0.39
COL5A3-201ENST00000264828 HAPLN3Q96S86 360 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 CARS2Q9HA77 564 aaKnown RBP17.49■□□□□ 0.39
COL5A3-201ENST00000264828 GIMAP2Q9UG22 337 aa17.49■□□□□ 0.39
COL5A3-201ENST00000264828 DUXAA6NLW8 204 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 GRXCR1A8MXD5 290 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 ZNF670-ZNF695F2Z2N8 137 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 G6PDP11413 515 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 CD40LGP29965 261 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 GPX6P59796 221 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 ZNF280AP59817 542 aaPredicted RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 TBC1D25Q3MII6 688 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 TIGD5Q53EQ6 642 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 EPGNQ6UW88 154 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 PACRGLQ8N7B6 248 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 POGLUT1Q8NBL1 392 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 RFT1Q96AA3 541 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 MAF1Q9H063 256 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 CUEDC1Q9NWM3 386 aaPredicted RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 THUMPD1Q9NXG2 353 aaKnown RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 VNN3Q9NY84 501 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 ST14Q9Y5Y6 855 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 CLCA3PQ9Y6N3 262 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 PLIN4Q96Q06 1357 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 CICQ96RK0 1608 aaPredicted RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 MEN1O00255 615 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 WNT9AO14904 365 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 ATP5A1P25705 553 aaKnown RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 MLLT3P42568 568 aaPredicted RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 RGS19P49795 217 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 RPL19P84098 196 aaKnown RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 KCNJ11Q14654 390 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 FRG2Q64ET8 278 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 ZNF527Q8NB42 609 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 GALNT11Q8NCW6 608 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 FRG2BQ96QU4 278 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 RNF6Q9Y252 685 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 PSMA6P60900 246 aaKnown RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 PRKCZQ05513 592 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 NFATC2Q13469 925 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 RABL3Q5HYI8 236 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 MKLN1Q9UL63 735 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 INHAP05111 366 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 CBLP22681 906 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 GDPD4Q6W3E5 623 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 STOML3Q8TAV4 291 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 GKN1Q9NS71 199 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 PIGVQ9NUD9 493 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms