RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PPT2Q9UMR5 302 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 CMAHPQ9Y471 501 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 RAI2Q9Y5P3 530 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 SCAMP3O14828 347 aaKnown RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 SDC1P18827 310 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 GDF5P43026 501 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 KCNJ10P78508 379 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 RHAGQ02094 409 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 RING1Q06587 406 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 ARHGEF6Q15052 776 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 TEAD4Q15561 434 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 SYNPOQ8N3V7 929 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 SPERTQ8NA61 448 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 B3GNT7Q8NFL0 401 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 LPPQ93052 612 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 MTFMTQ96DP5 389 aaKnown RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 MAGEB10Q96LZ2 347 aaPredicted RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 MAPKAP1Q9BPZ7 522 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 CNPPD1Q9BV87 410 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 TTLL2Q9BWV7 592 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 RANGRFQ9HD47 186 aaPredicted RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 BPIFA1Q9NP55 256 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 PLSCR3Q9NRY6 295 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 TSR3Q9UJK0 312 aaKnown RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 FNDC3AQ9Y2H6 1198 aaKnown RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 V9GYH0 126 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 A0A0U1RQS6 177 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 IQCMA0A1B0GVH7 501 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 F5H5T6 163 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PDYNP01213 254 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 ANXA5P08758 320 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 COL6A1P12109 1028 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PIPP12273 146 aaPredicted RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PSMA1P25786 263 aaKnown RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 HTR2BP41595 481 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PURAQ00577 322 aaKnown RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 SLC14A1Q13336 389 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 QPRTQ15274 297 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 CPSF6Q16630 551 aaKnown RBP eCLIP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 HKDC1Q2TB90 917 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 GGTA1PQ4G0N0 100 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PLAG1Q6DJT9 500 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 MRPL10Q7Z7H8 261 aaKnown RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 FAM124AQ86V42 546 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 RBFAQ8N0V3 343 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 CADM2Q8N3J6 435 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 FAM109AQ8N4B1 249 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 SLC5A8Q8N695 610 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 OR9Q1Q8NGQ5 310 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PPP1R13LQ8WUF5 828 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 CDCA5Q96FF9 252 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 SUSD3Q96L08 255 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 DHRS9Q9BPW9 319 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 TINF2Q9BSI4 451 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 CCM2Q9BSQ5 444 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 TAPBPLQ9BX59 468 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 RNF121Q9H920 327 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 EXOSC4Q9NPD3 245 aaKnown RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PRDM8Q9NQV8 689 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 TOR4AQ9NXH8 423 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 MUTYHQ9UIF7 546 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 ST3GAL5Q9UNP4 418 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 DOCK4Q8N1I0 1966 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PLXNB2O15031 1838 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PAPPA2Q9BXP8 1791 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 A0A1W2PQ09 198 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 SLC12A8A0AV02 714 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 ADM5C9JUS6 153 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 TFECO14948 347 aaPredicted RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 KDELR3O43731 214 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 CYP7B1O75881 506 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 SCG5P05408 212 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 CR2P20023 1033 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 ENDOUP21128 410 aaKnown RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 TACR2P21452 398 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 HOXD9P28356 352 aaPredicted RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 OR3A3P47888 321 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PSPHP78330 225 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 TARDBPQ13148 414 aaKnown RBP eCLIP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 MICAQ29983 383 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PAN2Q504Q3 1202 aaKnown RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 SLC39A12Q504Y0 691 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PDZK1Q5T2W1 519 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 LYPLAL1Q5VWZ2 237 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 Q6ZPB1 254 aaPredicted RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 C1orf52Q8N6N3 182 aaKnown RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 FAM181AQ8N9Y4 354 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 WDR36Q8NI36 951 aaKnown RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 GPR151Q8TDV0 419 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 KIAA1143Q96AT1 154 aaPredicted RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 FUBP3Q96I24 572 aaKnown RBP eCLIP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 SPON2Q9BUD6 331 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 HTATIP2Q9BUP3 242 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 SLC32A1Q9H598 525 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 ABCB8Q9NUT2 735 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 NUFIP1Q9UHK0 495 aaKnown RBP11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 PCDHB11Q9Y5F2 797 aa11.97□□□□□ -0.49
CHMP2B-201ENST00000263780 SERTM1A2A2V5 107 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 SEC14L5O43304 696 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 GPX5O75715 221 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms