RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PPP1R14BQ96C90 147 aa8.82□□□□□ -1
MSH4-201ENST00000263187 YIPF6Q96EC8 236 aa8.82□□□□□ -1
MSH4-201ENST00000263187 CNDP2Q96KP4 475 aaKnown RBP8.82□□□□□ -1
MSH4-201ENST00000263187 RDH12Q96NR8 316 aa8.82□□□□□ -1
MSH4-201ENST00000263187 ZNF300Q96RE9 604 aaPredicted RBP8.82□□□□□ -1
MSH4-201ENST00000263187 NIPSNAP1Q9BPW8 284 aa8.82□□□□□ -1
MSH4-201ENST00000263187 KCNS3Q9BQ31 491 aa8.82□□□□□ -1
MSH4-201ENST00000263187 DSN1Q9H410 356 aa8.82□□□□□ -1
MSH4-201ENST00000263187 DUSP21Q9H596 190 aa8.82□□□□□ -1
MSH4-201ENST00000263187 BRD9Q9H8M2 597 aa8.82□□□□□ -1
MSH4-201ENST00000263187 TM9SF3Q9HD45 589 aa8.82□□□□□ -1
MSH4-201ENST00000263187 SAGE1Q9NXZ1 904 aa8.82□□□□□ -1
MSH4-201ENST00000263187 B4GALT6Q9UBX8 382 aa8.82□□□□□ -1
MSH4-201ENST00000263187 SH3BP1Q9Y3L3 701 aa8.82□□□□□ -1
MSH4-201ENST00000263187 SMIM30A4D0T7 59 aa8.81□□□□□ -1
MSH4-201ENST00000263187 GRXCR2A6NFK2 248 aa8.81□□□□□ -1
MSH4-201ENST00000263187 TTC34A8MYJ7 566 aa8.81□□□□□ -1
MSH4-201ENST00000263187 SSX4O60224 188 aa8.81□□□□□ -1
MSH4-201ENST00000263187 ANXA4P09525 319 aaPredicted RBP8.81□□□□□ -1
MSH4-201ENST00000263187 SELPP16109 830 aa8.81□□□□□ -1
MSH4-201ENST00000263187 FPR1P21462 350 aa8.81□□□□□ -1
MSH4-201ENST00000263187 NR4A2P43354 598 aa8.81□□□□□ -1
MSH4-201ENST00000263187 WNT3P56703 355 aa8.81□□□□□ -1
MSH4-201ENST00000263187 AP1S1P61966 158 aa8.81□□□□□ -1
MSH4-201ENST00000263187 SFSWAPQ12872 951 aaKnown RBP8.81□□□□□ -1
MSH4-201ENST00000263187 DOC2AQ14183 400 aa8.81□□□□□ -1
MSH4-201ENST00000263187 VEPH1Q14D04 833 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CDKN3Q16667 212 aa8.81□□□□□ -1
MSH4-201ENST00000263187 HIST2H2ACQ16777 129 aaPredicted RBP8.81□□□□□ -1
MSH4-201ENST00000263187 LRIF1Q5T3J3 769 aa8.81□□□□□ -1
MSH4-201ENST00000263187 MACC1Q6ZN28 852 aa8.81□□□□□ -1
MSH4-201ENST00000263187 OTOP2Q7RTS6 562 aa8.81□□□□□ -1
MSH4-201ENST00000263187 NPAS4Q8IUM7 802 aa8.81□□□□□ -1
MSH4-201ENST00000263187 ZNF461Q8TAF7 563 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CDK5RAP1Q96SZ6 601 aaKnown RBP8.81□□□□□ -1
MSH4-201ENST00000263187 TCF25Q9BQ70 676 aa8.81□□□□□ -1
MSH4-201ENST00000263187 MROQ9BYG7 248 aa8.81□□□□□ -1
MSH4-201ENST00000263187 WDR12Q9GZL7 423 aaKnown RBP8.81□□□□□ -1
MSH4-201ENST00000263187 SIAEQ9HAT2 523 aa8.81□□□□□ -1
MSH4-201ENST00000263187 SGK2Q9HBY8 427 aa8.81□□□□□ -1
MSH4-201ENST00000263187 DNAJC11Q9NVH1 559 aa8.81□□□□□ -1
MSH4-201ENST00000263187 C14orf119Q9NWQ9 140 aa8.81□□□□□ -1
MSH4-201ENST00000263187 PLXNA3P51805 1871 aa8.81□□□□□ -1
MSH4-201ENST00000263187 PNMA8CA0A1B0GUJ8 204 aa8.81□□□□□ -1
MSH4-201ENST00000263187 A0A1W2PRU2 124 aa8.81□□□□□ -1
MSH4-201ENST00000263187 GFRA2O00451 464 aa8.81□□□□□ -1
MSH4-201ENST00000263187 KPNA5O15131 536 aa8.81□□□□□ -1
MSH4-201ENST00000263187 SLC22A1O15245 554 aa8.81□□□□□ -1
MSH4-201ENST00000263187 SUV39H1O43463 412 aa8.81□□□□□ -1
MSH4-201ENST00000263187 TLL1O43897 1013 aa8.81□□□□□ -1
MSH4-201ENST00000263187 IGSF6O95976 241 aa8.81□□□□□ -1
MSH4-201ENST00000263187 OR56A5P0C7T3 313 aa8.81□□□□□ -1
MSH4-201ENST00000263187 FEN1P39748 380 aaKnown RBP8.81□□□□□ -1
MSH4-201ENST00000263187 SERPINB10P48595 397 aa8.81□□□□□ -1
MSH4-201ENST00000263187 RPS26P62854 115 aaKnown RBP8.81□□□□□ -1
MSH4-201ENST00000263187 SPIBQ01892 262 aa8.81□□□□□ -1
MSH4-201ENST00000263187 LRRC74AQ0VAA2 488 aa8.81□□□□□ -1
MSH4-201ENST00000263187 TIGD6Q17RP2 521 aa8.81□□□□□ -1
MSH4-201ENST00000263187 OR4A15Q8NGL6 344 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CENPOQ9BU64 300 aa8.81□□□□□ -1
MSH4-201ENST00000263187 DUSP26Q9BV47 211 aa8.81□□□□□ -1
MSH4-201ENST00000263187 ACAT2Q9BWD1 397 aa8.81□□□□□ -1
MSH4-201ENST00000263187 SORBS1Q9BX66 1292 aaKnown RBP8.81□□□□□ -1
MSH4-201ENST00000263187 SLIRPQ9GZT3 109 aaKnown RBP8.81□□□□□ -1
MSH4-201ENST00000263187 QPCTLQ9NXS2 382 aa8.81□□□□□ -1
MSH4-201ENST00000263187 ZDHHC3Q9NYG2 299 aa8.81□□□□□ -1
MSH4-201ENST00000263187 VPS29Q9UBQ0 182 aa8.81□□□□□ -1
MSH4-201ENST00000263187 PCDHGA6Q9Y5G7 932 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CCDC88CQ9P219 2028 aa8.81□□□□□ -1
MSH4-201ENST00000263187 MGAT4DA6NG13 374 aa8.81□□□□□ -1
MSH4-201ENST00000263187 TNFRSF11BO00300 401 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CNOT3O75175 753 aaKnown RBP8.81□□□□□ -1
MSH4-201ENST00000263187 TGFB1P01137 390 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CD9P21926 228 aa8.81□□□□□ -1
MSH4-201ENST00000263187 RPS3P23396 243 aaKnown RBP eCLIP8.81□□□□□ -1
MSH4-201ENST00000263187 PDHA2P29803 388 aa8.81□□□□□ -1
MSH4-201ENST00000263187 SOAT1P35610 550 aa8.81□□□□□ -1
MSH4-201ENST00000263187 PFN3P60673 137 aa8.81□□□□□ -1
MSH4-201ENST00000263187 MED22Q15528 200 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CPTPQ5TA50 214 aa8.81□□□□□ -1
MSH4-201ENST00000263187 SLC8B1Q6J4K2 584 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CAPN13Q6MZZ7 669 aaPredicted RBP8.81□□□□□ -1
MSH4-201ENST00000263187 PLEKHG7Q6ZR37 379 aa8.81□□□□□ -1
MSH4-201ENST00000263187 PLPP6Q8IY26 295 aa8.81□□□□□ -1
MSH4-201ENST00000263187 DCAF4L2Q8NA75 395 aa8.81□□□□□ -1
MSH4-201ENST00000263187 OR2AP1Q8NGE2 309 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CYB5D2Q8WUJ1 264 aa8.81□□□□□ -1
MSH4-201ENST00000263187 ASB11Q8WXH4 323 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CMTM7Q96FZ5 175 aa8.81□□□□□ -1
MSH4-201ENST00000263187 BTBD2Q9BX70 525 aa8.81□□□□□ -1
MSH4-201ENST00000263187 MAGIXQ9H6Y5 334 aa8.81□□□□□ -1
MSH4-201ENST00000263187 CWH43Q9H720 699 aa8.81□□□□□ -1
MSH4-201ENST00000263187 SCHIP1Q9P0W5 487 aaPredicted RBP8.81□□□□□ -1
MSH4-201ENST00000263187 SPASTQ9UBP0 616 aa8.81□□□□□ -1
MSH4-201ENST00000263187 NDRG4Q9ULP0 352 aaKnown RBP8.81□□□□□ -1
MSH4-201ENST00000263187 CCL26Q9Y258 94 aa8.81□□□□□ -1
MSH4-201ENST00000263187 EYSQ5T1H1 3165 aa8.8□□□□□ -1
MSH4-201ENST00000263187 KCNE1BA0A087WTH5 132 aa8.8□□□□□ -1
MSH4-201ENST00000263187 A8MV72 311 aaPredicted RBP8.8□□□□□ -1
MSH4-201ENST00000263187 PSMD11O00231 422 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms