RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 HNMTP50135 292 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 FAM209AQ5JX71 171 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 SLC22A15Q8IZD6 547 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 SVOPLQ8N434 492 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 BEND7Q8N7W2 519 aaPredicted RBP21.85■■□□□ 1.09
MCF2L-201ENST00000261963 TP53INP1Q96A56 240 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 HIST1H2AHQ96KK5 128 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 HHIPQ96QV1 700 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 HIST1H2AJQ99878 128 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 H2AFJQ9BTM1 129 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 HCFC1R1Q9NWW0 138 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 ERVK-18Q9QC07 812 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 C3orf18Q9UK00 162 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 AP3M1Q9Y2T2 418 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 NEDD8-MDP1E9PL57 170 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 GNGT2O14610 69 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 SGTAO43765 313 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 CREG1O75629 220 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 CCNKO75909 580 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 RETP07949 1114 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 ITPKAP23677 461 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 RYKP34925 604 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 PPM1AP35813 382 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 CREMQ03060 361 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 CDK5R2Q13319 367 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 PLEKHS1Q5SXH7 462 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 ANKRD34AQ69YU3 496 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 TUBA3EQ6PEY2 450 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 OR2A12Q8NGT7 310 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 DNAJB8Q8NHS0 232 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 CMTM7Q96FZ5 175 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 EGLN2Q96KS0 407 aa21.85■■□□□ 1.09
MCF2L-201ENST00000261963 NPIPB8E9PQR5 432 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 TAF4O00268 1085 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 CCL16O15467 120 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 HOXC11O43248 304 aaPredicted RBP21.84■■□□□ 1.09
MCF2L-201ENST00000261963 SPNP16150 400 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 ITGB8P26012 769 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 PSMB9P28065 219 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 ST13P50502 369 aaKnown RBP21.84■■□□□ 1.09
MCF2L-201ENST00000261963 DESI1Q6ICB0 168 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 GDPD4Q6W3E5 623 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 CCDC103Q8IW40 242 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 CNIH3Q8TBE1 160 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 NETO1Q8TDF5 533 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 TESCQ96BS2 214 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 LGALS12Q96DT0 336 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 ASAH2Q9NR71 780 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 OSGIN1Q9UJX0 560 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 HS6ST1O60243 411 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 SP140Q13342 867 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 DGCR6Q14129 220 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 SYT6Q5T7P8 510 aaPredicted RBP21.84■■□□□ 1.09
MCF2L-201ENST00000261963 TMC5Q6UXY8 1006 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 FKBP9P1Q75LS8 142 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 ZNF551Q7Z340 670 aaPredicted RBP21.84■■□□□ 1.09
MCF2L-201ENST00000261963 HSD11B1LQ7Z5J1 315 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 RNF175Q8N4F7 328 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 KREMEN2Q8NCW0 462 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 NCLNQ969V3 563 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 DNAJC11Q9NVH1 559 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 GPRC5BQ9NZH0 403 aa21.84■■□□□ 1.09
MCF2L-201ENST00000261963 SLC16A5O15375 505 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 ANGPTL1O95841 491 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 IL5RAQ01344 420 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 NPTX1Q15818 432 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 SPESP1Q6UW49 350 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 CCDC81Q6ZN84 652 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 CCDC149Q6ZUS6 474 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 RASGRP3Q8IV61 690 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 ATL1Q8WXF7 558 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 TCEAL4Q96EI5 215 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 FAM120BQ96EK7 910 aaKnown RBP21.83■■□□□ 1.09
MCF2L-201ENST00000261963 ITCHQ96J02 903 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 APOLD1Q96LR9 279 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 ATG10Q9H0Y0 220 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 PCDHGA10Q9Y5H3 936 aa21.83■■□□□ 1.09
MCF2L-201ENST00000261963 LRATO95237 230 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 AMD1P17707 334 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 IL18R1Q13478 541 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 CLCA4Q14CN2 919 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 COLEC12Q5KU26 742 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 UBE2UQ5VVX9 321 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 FRG2Q64ET8 278 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 ADIPOR2Q86V24 386 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 PROX1Q92786 737 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 ZHX1-C8orf76Q96EF9 292 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 FRG2BQ96QU4 278 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 PNMA8BQ9ULN7 279 aaPredicted RBP21.82■■□□□ 1.08
MCF2L-201ENST00000261963 CARD8Q9Y2G2 431 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 WASH3PC4AMC7 463 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 SCO2O43819 266 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 SERPINA1P01009 418 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 CYP2A7P20853 494 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 PFN3P60673 137 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 PPP1R8Q12972 351 aaKnown RBP21.82■■□□□ 1.08
MCF2L-201ENST00000261963 SLC14A1Q13336 389 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 TMEM179BQ7Z7N9 219 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 TMEM132CQ8N3T6 1108 aa21.82■■□□□ 1.08
MCF2L-201ENST00000261963 BBS2Q9BXC9 721 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms