RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CTXN3Q4LDR2 81 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 C10orf62Q5T681 223 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-201ENST00000261366 NEK5Q6P3R8 708 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 SLC44A2Q8IWA5 706 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-201ENST00000261366 SIX5Q8N196 739 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 ZBTB2Q8N680 514 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 B3GNT7Q8NFL0 401 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 PHOX2BQ99453 314 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 COPS8Q99627 209 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 RANGRFQ9HD47 186 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-201ENST00000261366 NUFIP1Q9UHK0 495 aaKnown RBP15.38■□□□□ 0.05
LMNB1-201ENST00000261366 CRLS1Q9UJA2 301 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 FAM172BPA6NC97 362 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 K7ERQ8 282 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 WWP2O00308 870 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 EBLN1P0CF75 366 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 CR2P20023 1033 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 DGKAP23743 735 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 PAX3P23760 479 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 RPIAP49247 311 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 HSPA14Q0VDF9 509 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 BAK1Q16611 211 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 TRAF7Q6Q0C0 670 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 LYPD8Q6UX82 237 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 FAM124AQ86V42 546 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 ZSWIM9Q86XI8 627 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 UBQLNLQ8IYU4 475 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 CADM2Q8N3J6 435 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 TRPV1Q8NER1 839 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 OR10G2Q8NGC3 310 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 WDR36Q8NI36 951 aaKnown RBP15.38■□□□□ 0.05
LMNB1-201ENST00000261366 FCGR1BQ92637 280 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 IL4I1Q96RQ9 567 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 ANKHQ9HCJ1 492 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 IL17CQ9P0M4 197 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 PCDHB5Q9Y5E4 795 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 SUV39H1O43463 412 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 SEMA3DO95025 777 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 GJB5O95377 273 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 CHRNB1P11230 501 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 LAMP1P11279 417 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 PRKCAP17252 672 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 EPORP19235 508 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 ITGA1P56199 1179 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 SMUG1Q53HV7 270 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 FAHD1Q6P587 224 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 EIF3MQ7L2H7 374 aaKnown RBP15.37■□□□□ 0.05
LMNB1-201ENST00000261366 LAX1Q8IWV1 398 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 CCDC177Q9NQR7 707 aaPredicted RBP15.37■□□□□ 0.05
LMNB1-201ENST00000261366 GIMAP4Q9NUV9 329 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 FZD4Q9ULV1 537 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 PTPRDP23468 1912 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 PRRC2BQ5JSZ5 2229 aaKnown RBP15.37■□□□□ 0.05
LMNB1-201ENST00000261366 CLDN7O95471 211 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 SSTR4P31391 388 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 GGT2P36268 569 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 CRYBA2P53672 197 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 CCL23P55773 120 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 CLPPQ16740 277 aaPredicted RBP15.37■□□□□ 0.05
LMNB1-201ENST00000261366 FAM209AQ5JX71 171 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 CBLL1Q75N03 491 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 USP7Q93009 1102 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 ST6GAL2Q96JF0 529 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 OR2A14Q96R47 310 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 MGLLQ99685 303 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 MAGEH1Q9H213 219 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 TPT1P8Q9HAU6 139 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 ZNF226Q9NYT6 803 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 SLC22A14Q9Y267 594 aa15.37■□□□□ 0.05
LMNB1-201ENST00000261366 NINQ8N4C6 2090 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 EFCAB10A6NFE3 127 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 FAM227AF5H4B4 570 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 AKR1A1P14550 325 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 FEN1P39748 380 aaKnown RBP15.36■□□□□ 0.05
LMNB1-201ENST00000261366 DUSP4Q13115 394 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 PPIGQ13427 754 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■□□□ 11.4
LMNB1-201ENST00000261366 DUOXA1Q1HG43 343 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 ZXDCQ2QGD7 858 aaPredicted RBP15.36■□□□□ 0.05
LMNB1-201ENST00000261366 UAP1L1Q3KQV9 507 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 NOXRED1Q6NXP6 359 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 IFNL1Q8IU54 200 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 STK40Q8N2I9 435 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 CLIP3Q96DZ5 547 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 PITX2Q99697 317 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 MKLN1Q9UL63 735 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 MAN2B2Q9Y2E5 1009 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.36■□□□□ 0.05
LMNB1-201ENST00000261366 CRATP43155 626 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 ARPC4P59998 168 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 NKX3-2P78367 333 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 CRHR2Q13324 411 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 ZNF177Q13360 481 aaPredicted RBP15.36■□□□□ 0.05
LMNB1-201ENST00000261366 UGT8Q16880 541 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 Q5BKY6 102 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 ADNP2Q6IQ32 1131 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 RAB43Q86YS6 212 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 COL21A1Q96P44 957 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 ARHGAP39Q9C0H5 1083 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 TRPS1Q9UHF7 1281 aa15.36■□□□□ 0.05
LMNB1-201ENST00000261366 MANSC4A6NHS7 340 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms