RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 HCN3Q9P1Z3 774 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 SLC5A6Q9Y289 635 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 ITPR2Q14571 2701 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 CELSR2Q9HCU4 2923 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 IGHV3-20A0A0C4DH32 117 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 OR2W5A6NFC9 320 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 ZSCAN12O43309 604 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 LCMT2O60294 686 aaKnown RBP18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 BMP10O95393 424 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 CLDN1O95832 211 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 SERPINA7P05543 415 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 C8GP07360 202 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 IL1RNP18510 177 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 RPS15AP62244 130 aaKnown RBP18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 PCOLCEQ15113 449 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 MFSD4BQ5TF39 518 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 ST6GALNAC3Q8NDV1 305 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 ZCCHC10Q8TBK6 192 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 FAR1Q8WVX9 515 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 CERS2Q96G23 380 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 CFAP36Q96G28 342 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 CAPZA3Q96KX2 299 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 C5orf34Q96MH7 638 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 KCNF1Q9H3M0 494 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 SCN2AQ99250 2005 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 A0A1W2PQ72 361 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 WIPF3A6NGB9 483 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 SGK494L7N484 410 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 E2F3O00716 465 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 WFS1O76024 890 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 TTC4O95801 387 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 ITGAMP11215 1152 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 CDH1P12830 882 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 IVDP26440 423 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 SOX11P35716 441 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 BCL6P41182 706 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 ZXDCQ2QGD7 858 aaPredicted RBP18■□□□□ 0.47
TM6SF1-201ENST00000258909 MINDY4Q4G0A6 757 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 LRRC8EQ6NSJ5 796 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 TMEM205Q6UW68 189 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 LANCL3Q6ZV70 420 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 C17orf64Q86WR6 236 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 GPATCH11Q8N954 259 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 KCT2Q8NC54 265 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 PYCR2Q96C36 320 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 MAGEB10Q96LZ2 347 aaPredicted RBP18■□□□□ 0.47
TM6SF1-201ENST00000258909 ZNF700Q9H0M5 742 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 PCBD2Q9H0N5 130 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 RIC8BQ9NVN3 520 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 CHMP2BQ9UQN3 213 aa18■□□□□ 0.47
TM6SF1-201ENST00000258909 CACNA1DQ01668 2161 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 CPAMD8Q8IZJ3 1885 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 KCNE1BA0A087WTH5 132 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 LOC102723996A0A087X1L8 192 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 DYTNA2CJ06 578 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 CES2O00748 559 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 C8orf89P0DMQ9 161 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 HRH2P25021 359 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 ELK3P41970 407 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 MEF2AQ02078 507 aaPredicted RBP17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 TEDDM1Q5T9Z0 273 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 TRMT10BQ6PF06 316 aaKnown RBP17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 PCGF5Q86SE9 256 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 SLC26A11Q86WA9 606 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 CNTN4Q8IWV2 1026 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 KLHL7Q8IXQ5 586 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 OR51Q1Q8NH59 317 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 VN1R1Q9GZP7 353 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 OSGIN2Q9Y236 505 aa17.99■□□□□ 0.47
TM6SF1-201ENST00000258909 H0YIG0 161 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 SLC16A5O15375 505 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 SEC24DO94855 1032 aaPredicted RBP17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 NSA2O95478 260 aaKnown RBP17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 TSPAN12O95859 305 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 HIST1H2AGP0C0S8 130 aaPredicted RBP17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 NPPBP16860 134 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 HIST1H2ADP20671 130 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 XCR1P46094 333 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 TNFSF10P50591 281 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 SRSF11Q05519 484 aaKnown RBP17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 SP140Q13342 867 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 PDAP1Q13442 181 aaKnown RBP17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 TMEM214Q6NUQ4 689 aaKnown RBP17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 FAM180AQ6UWF9 173 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 ASPGQ86U10 573 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 PDSS2Q86YH6 399 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 GABPB2Q8TAK5 448 aaPredicted RBP17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 SLC13A3Q8WWT9 602 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 METTL21AQ8WXB1 218 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 TM4SF19Q96DZ7 209 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 HIST1H2AHQ96KK5 128 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 IMMP1LQ96LU5 166 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 HIST1H2AJQ99878 128 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 WDR83Q9BRX9 315 aaKnown RBP17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 NAT9Q9BTE0 207 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 H2AFJQ9BTM1 129 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 SGPP1Q9BX95 441 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 ARL15Q9NXU5 204 aa17.98■□□□□ 0.47
TM6SF1-201ENST00000258909 CROCCQ5TZA2 2017 aa17.97■□□□□ 0.47
TM6SF1-201ENST00000258909 USP27XA6NNY8 438 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms