RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 OR52E4Q8NGH9 312 aa18.14■□□□□ 0.5
SMARCC1-201ENST00000254480 NKX1-2Q9UD57 310 aaPredicted RBP18.14■□□□□ 0.5
SMARCC1-201ENST00000254480 FAM170BA6NMN3 283 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 CSF2RAP15509 400 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 PRMT2P55345 433 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 ARFRP1Q13795 201 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 KLHL22Q53GT1 634 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 DGLUCYQ7Z3D6 616 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 SAMD14Q8IZD0 417 aaPredicted RBP18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 GPR62Q9BZJ7 368 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 ATXN10Q9UBB4 475 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 H1F0P07305 194 aaKnown RBP18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 GSK3BP49841 420 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 CEP97Q8IW35 865 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 HCAR2Q8TDS4 363 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 SLC5A11Q8WWX8 675 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 OR8D2Q9GZM6 311 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 MTTPP55157 894 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 YIPF7Q8N8F6 280 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 CCDC115Q96NT0 180 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 PCYT2Q99447 389 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 C2orf78A6NCI8 922 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 GRID2O43424 1007 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 S100A9P06702 114 aaKnown RBP18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 PAFAH1B3Q15102 231 aaKnown RBP18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 DPY19L1Q2PZI1 675 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 TBC1D25Q3MII6 688 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF527Q8NB42 609 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 SMPDL3AQ92484 453 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 HSPBAP1Q96EW2 488 aa18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 NSUN5Q96P11 429 aaKnown RBP18.14■□□□□ 0.49
SMARCC1-201ENST00000254480 CLIC3O95833 236 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 MATN1P21941 496 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 ATP5A1P25705 553 aaKnown RBP18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 GBX2P52951 348 aaPredicted RBP18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 CDKL1Q00532 357 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 GALNT2Q10471 571 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 TMEM115Q12893 351 aaPredicted RBP18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 MARCH9Q86YJ5 346 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 KLF8O95600 359 aaPredicted RBP18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 TGFBIQ15582 683 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 SCGB2B2Q4G0G5 96 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 KLHL36Q8N4N3 616 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 NPY6RQ99463 290 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 PTGDR2Q9Y5Y4 395 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 A0A1W2PP55 124 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 HYKKA2RU49 373 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 H6PDO95479 791 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 ECHS1P30084 290 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 SOX4Q06945 474 aaPredicted RBP18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 SEMA3AQ14563 771 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 KLHL26Q53HC5 615 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 OR4K17Q8NGC6 315 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 HAVCR1Q96D42 359 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 RPL36Q9Y3U8 105 aaKnown RBP18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 C3P01024 1663 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 C5orf51A6NDU8 294 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 DNAJA1P31689 397 aaKnown RBP18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 STC1P52823 247 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 SERINC3Q13530 473 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 RIN1Q13671 783 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 TAS1R3Q7RTX0 852 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 METTL7AQ9H8H3 244 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 PRAMEF11O60813 436 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 OR3A3P47888 321 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 OR3A2P47893 321 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 HCAR3P49019 387 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 RPS3AP61247 264 aaKnown RBP18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 PCLAFQ15004 111 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 STON2Q8WXE9 905 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 HSH2DQ96JZ2 352 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 TMEM248Q9NWD8 314 aa18.13■□□□□ 0.49
SMARCC1-201ENST00000254480 TLX2O43763 284 aaPredicted RBP18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 HSD17B2P37059 387 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 TTLL10Q6ZVT0 673 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 SYVN1Q86TM6 617 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 AURKBQ96GD4 344 aaPredicted RBP18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 FAXDC2Q96IV6 333 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 LDAHQ9H6V9 325 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 FZD3Q9NPG1 666 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 SERINC1Q9NRX5 453 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 TAS2R7Q9NYW3 318 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF224Q9NZL3 707 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 DLGAP4Q9Y2H0 992 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 SERPINA3P01011 423 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 GALTP07902 379 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 VBP1P61758 197 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF101Q8IZC7 436 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 CCDC120Q96HB5 630 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 TUBGCP5Q96RT8 1024 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 TMEM165Q9HC07 324 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 PRH1P02810 166 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 RORCP51449 518 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 DCDC1P59894 354 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 TSTQ16762 297 aaKnown RBP18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 RBM48Q5RL73 367 aaKnown RBP18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 IGSF8Q969P0 613 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 GPR22Q99680 433 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 VILLO15195 856 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 HNF1BP35680 557 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms