RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FRMPD2BQ6IN97 320 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 LETMD1Q6P1Q0 360 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 LSMEM2Q8N112 164 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 ARHGEF39Q8N4T4 335 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 ANKRD53Q8N9V6 530 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 OR4F6Q8NGB9 312 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 OR1L3Q8NH93 324 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 TRPC4APQ8TEL6 797 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 MOCOSQ96EN8 888 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 OR6C1Q96RD1 312 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 TAAR9Q96RI9 348 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 SLC29A3Q9BZD2 475 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 PSD3Q9NYI0 1048 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 ADGRE2Q9UHX3 823 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 HAO1Q9UJM8 370 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 SATB2Q9UPW6 733 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 RNF11Q9Y3C5 154 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 LOC105369274A0A096LPK9 316 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 LOC102723532A0A0G2JNH3 316 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 A0A0J9YVX5 310 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 FEZF1A0PJY2 475 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 TMEM150CB9EJG8 249 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 H0YGG7 62 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 TXNDC9O14530 226 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 KLF11O14901 512 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 POLR1CO15160 346 aaPredicted RBP13.48□□□□□ -0.25
VPS25-201ENST00000253794 FGF4P08620 206 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 JMJD7P0C870 316 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 CHN1P15882 459 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 ARRB2P32121 409 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 ETV5P41161 510 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 ITGA1P56199 1179 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 ARF3P61204 181 aaPredicted RBP13.48□□□□□ -0.25
VPS25-201ENST00000253794 SHC2P98077 582 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 MEF2AQ02078 507 aaPredicted RBP13.48□□□□□ -0.25
VPS25-201ENST00000253794 ZNF33BQ06732 778 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 FOXC1Q12948 553 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 PWP1Q13610 501 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 CHI3L2Q15782 390 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 RBBP7Q16576 425 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 PRTGQ2VWP7 1150 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 DEFB110Q30KQ9 67 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 YOD1Q5VVQ6 348 aaPredicted RBP13.48□□□□□ -0.25
VPS25-201ENST00000253794 CES4AQ5XG92 561 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 MED27Q6P2C8 311 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 TLDC1Q6P9B6 456 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 CEACAM20Q6UY09 585 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 RNF165Q6ZSG1 346 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 GPRIN3Q6ZVF9 776 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 MILR1Q7Z6M3 343 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 SYVN1Q86TM6 617 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 PPP1R3BQ86XI6 285 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 PLD3Q8IV08 490 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 TRIM42Q8IWZ5 723 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 OR4N4Q8N0Y3 316 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 ARFGAP2Q8N6H7 521 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 TRPV3Q8NET8 790 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 OR7G3Q8NG95 312 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 WDR20Q8TBZ3 569 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 MDM1Q8TC05 714 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 NT5CQ8TCD5 201 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 CREB3L4Q8TEY5 395 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 ATP6V1E2Q96A05 226 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 SCNM1Q9BWG6 230 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 ASPSCR1Q9BZE9 553 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 MLXIPLQ9NP71 852 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 ACSS2Q9NR19 701 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 SERTAD3Q9UJW9 196 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 KLK13Q9UKR3 277 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 RARRES3Q9UL19 164 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 MSRB2Q9Y3D2 182 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 PCDHB3Q9Y5E6 796 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 PCDHGA7Q9Y5G6 932 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 PCDHGA11Q9Y5H2 935 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 CEP295Q9C0D2 2601 aa13.48□□□□□ -0.25
VPS25-201ENST00000253794 SERTM1A2A2V5 107 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 PMS2P1A4D2B8 440 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 CDRT15L2A8MXV6 281 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 NVLO15381 856 aaKnown RBP13.47□□□□□ -0.25
VPS25-201ENST00000253794 ZSCAN9O15535 394 aaPredicted RBP13.47□□□□□ -0.25
VPS25-201ENST00000253794 OR1F1O43749 312 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 SNNO75324 88 aaPredicted RBP13.47□□□□□ -0.25
VPS25-201ENST00000253794 CLEC3AO75596 197 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 TBX6O95947 436 aaPredicted RBP13.47□□□□□ -0.25
VPS25-201ENST00000253794 HGFP14210 728 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 TSPAN8P19075 237 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 ITIH1P19827 911 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 PIK3CBP42338 1070 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 ADPRMQ3LIE5 342 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 ARL13AQ5H913 290 aaPredicted RBP13.47□□□□□ -0.25
VPS25-201ENST00000253794 C3orf38Q5JPI3 329 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 DCAF12Q5T6F0 453 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 GARNL3Q5VVW2 1013 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 ATG14Q6ZNE5 492 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 ZCCHC23Q6ZST2 131 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 ERMP1Q7Z2K6 904 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 VN1R5Q7Z5H4 357 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 ASPGQ86U10 573 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 MARCH9Q86YJ5 346 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms