RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ATXN10Q9UBB4 475 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 CDC14AQ9UNH5 594 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 ABCG2Q9UNQ0 655 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 TCF20Q9UGU0 1960 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 GABRR3A8MPY1 467 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 EVPLLA8MZ36 301 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 PSMD11O00231 422 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 SAP18O00422 153 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 ANXA4P09525 319 aaPredicted RBP18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 ADRB3P13945 408 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 IL7RP16871 459 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 ITGB7P26010 798 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 POLR2IP36954 125 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 OPRD1P41143 372 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 HNRNPA1L2Q32P51 320 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 CCNYL2Q5T2Q4 361 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 TRMT11Q7Z4G4 463 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 ZZZ3Q8IYH5 903 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 TERB1Q8NA31 727 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 OR8J2Q8NGG1 315 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 ELSPBP1Q96BH3 223 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 BARD1Q99728 777 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 MAGIXQ9H6Y5 334 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 FAM118AQ9NWS6 357 aa18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 NUP214P35658 2090 aaPredicted RBP18.02■□□□□ 0.48
PDLIM4-201ENST00000253754 SCAMP2O15127 329 aaKnown RBP18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 HS6ST1O60243 411 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 DIRAS1O95057 198 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 EPN2O95208 641 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 KCNK5O95279 499 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 HPRP00739 348 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 NUDT7P0C024 238 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 TRPC1P48995 793 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 VASPP50552 380 aaPredicted RBP18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 NFE2L1Q14494 772 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 DPY19L1Q2PZI1 675 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 MSANTD1Q6ZTZ1 278 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 KCTD8Q6ZWB6 473 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 Q7L0L9 218 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 SERPINA11Q86U17 422 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 CACUL1Q86Y37 369 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 PTOV1Q86YD1 416 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 ADAMTS16Q8TE57 1224 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 FAM129BQ96TA1 746 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 NRTNQ99748 197 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 DUSP26Q9BV47 211 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 ING2Q9H160 280 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 POLR1BQ9H9Y6 1135 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 MTCH2Q9Y6C9 303 aa18.02■□□□□ 0.47
PDLIM4-201ENST00000253754 LZTS3O60299 673 aaPredicted RBP18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 NPPBP16860 134 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 ZNF8P17098 575 aaPredicted RBP18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 ZNF234Q14588 700 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 NEDD8Q15843 81 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 VTCN1Q7Z7D3 282 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 MMAAQ8IVH4 418 aaKnown RBP18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 ZDHHC21Q8IVQ6 265 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 ADHFE1Q8IWW8 467 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 KLHDC8AQ8IYD2 350 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 C2orf73Q8N5S3 287 aaPredicted RBP18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 OR8D1Q8WZ84 308 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 PHF12Q96QT6 1004 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 SPNS1Q9H2V7 528 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 LMCD1Q9NZU5 365 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 PCDHGA8Q9Y5G5 932 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 KCNE2Q9Y6J6 123 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 GNG14A0A1W2PPG7 69 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 TMX2-CTNND1H3BSU7 103 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 PRMT3O60678 531 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 MYO1DO94832 1006 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 CCNDBP1O95273 360 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 KCNAB2Q13303 367 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 SLBPQ14493 270 aaKnown RBP eCLIP18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 EIF4HQ15056 248 aaKnown RBP18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 VMACQ2NL98 169 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 ZBED5Q49AG3 693 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 BCL7AQ4VC05 210 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 FAM83HQ6ZRV2 1179 aaPredicted RBP18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 EID3Q8N140 333 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 SVOPLQ8N434 492 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 CHTF18Q8WVB6 975 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 ATG2BQ96BY7 2078 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 ISOC1Q96CN7 298 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 TRMT61BQ9BVS5 477 aaKnown RBP18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 OCEL1Q9H607 264 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 BRF2Q9HAW0 419 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 EXD2Q9NVH0 621 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 FAM120CQ9NX05 1096 aaKnown RBP18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 PLAGL1Q9UM63 463 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 TMEM98Q9Y2Y6 226 aa18.01■□□□□ 0.47
PDLIM4-201ENST00000253754 hCG_2039718K7EN88 272 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 EEF1B2P24534 225 aaKnown RBP18■□□□□ 0.47
PDLIM4-201ENST00000253754 CASP9P55211 416 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 ESRRGP62508 458 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 ZNF33BQ06732 778 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 GAB1Q13480 694 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 RAB39AQ14964 217 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 CPTPQ5TA50 214 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 CAPN13Q6MZZ7 669 aaPredicted RBP18■□□□□ 0.47
PDLIM4-201ENST00000253754 MED27Q6P2C8 311 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms