RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZNF182P17025 639 aaPredicted RBP18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 CEBPBP17676 345 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 IDSP22304 550 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 NFATC3Q12968 1075 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 CDK5R2Q13319 367 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 GAB1Q13480 694 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 BIRC2Q13490 618 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 TUBA3CQ13748 450 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 E2F2Q14209 437 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 CATSPEREQ5SY80 951 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 PREBQ9HCU5 417 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 BLOC1S6Q9UL45 172 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 FZD4Q9ULV1 537 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 EXO1Q9UQ84 846 aaKnown RBP18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 INSL6Q9Y581 213 aa18.83■□□□□ 0.61
CDC42EP1-201ENST00000249014 hCG_2014768A0A024R1R8 64 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 PTGES3LE9PB15 166 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 SRPRAP08240 638 aaKnown RBP18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 CCNA2P20248 432 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 TBPL1P62380 186 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 IL18R1Q13478 541 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 KDM4DQ6B0I6 523 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 EIF3MQ7L2H7 374 aaKnown RBP18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZC3H7AQ8IWR0 971 aaKnown RBP18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 TBC1D15Q8TC07 691 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 HCAR2Q8TDS4 363 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 DTD2Q96FN9 168 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 COQ10AQ96MF6 247 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 FOPNLQ96NB1 174 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 C11orf49Q9H6J7 331 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 PRM3Q9NNZ6 103 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 IL23AQ9NPF7 189 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 AASSQ9UDR5 926 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 KCNE2Q9Y6J6 123 aa18.83■□□□□ 0.6
CDC42EP1-201ENST00000249014 XPNPEP2O43895 674 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 LILRB5O75023 590 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 FKBP9O95302 570 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 CTNNB1P35222 781 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 IRS1P35568 1242 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 ASMTP46597 345 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 CLK3P49761 638 aaKnown RBP18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 IL5RAQ01344 420 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 IL1RL1Q01638 556 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 BNIP3Q12983 259 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 TOP3AQ13472 1001 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 SIM2Q14190 667 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 PDE12Q6L8Q7 609 aaKnown RBP18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 KLHL35Q6PF15 583 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 XKR5Q6UX68 686 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 CAMKMTQ7Z624 323 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 CFAP206Q8IYR0 622 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 NRSN1Q8IZ57 195 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 CPA6Q8N4T0 437 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 STARD8Q92502 1023 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 MAL2Q969L2 176 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 NRBF2Q96F24 287 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 MYOCQ99972 504 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 TRIT1Q9H3H1 467 aaKnown RBP18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 RIBC2Q9H4K1 309 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 BTNL2Q9UIR0 455 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 VPS4AQ9UN37 437 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 NAALAD2Q9Y3Q0 740 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 C5orf42Q9H799 3197 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 NOL3O60936 208 aaKnown RBP18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 PCMT1P22061 227 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 TIA1P31483 386 aaKnown RBP eCLIP18.82■□□□□ 0.63e-7■■■■□ 19.4
CDC42EP1-201ENST00000249014 DNAJA1P31689 397 aaKnown RBP18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 VEZF1Q14119 521 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZNF385BQ569K4 471 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 SPIN4Q56A73 249 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 MED27Q6P2C8 311 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 SPRED2Q7Z698 418 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 NPAS3Q8IXF0 933 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 SYTL1Q8IYJ3 562 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZFP90Q8TF47 636 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 COQ8BQ96D53 544 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 HSPBAP1Q96EW2 488 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 PLGRKTQ9HBL7 147 aa18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 PDP1Q9P0J1 537 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP1-201ENST00000249014 GNG14A0A1W2PPG7 69 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 NPPBP16860 134 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 FPR1P21462 350 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 TSTA3Q13630 321 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 RGNQ15493 299 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 IQCCQ4KMZ1 466 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 LAIR1Q6GTX8 287 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 SPPL3Q8TCT6 385 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 MUL1Q969V5 352 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 NXPE3Q969Y0 559 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 FKBP10Q96AY3 582 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 TPD52L3Q96J77 140 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 MAGED4Q96JG8 741 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 NODALQ96S42 347 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 DGCR6LQ9BY27 220 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 OR2AG1Q9H205 316 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 SH3BP4Q9P0V3 963 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 FAF1Q9UNN5 650 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 MGAT4DA6NG13 374 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 PSMD11O00231 422 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 PLK4O00444 970 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms