RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 FUBP3Q96I24 572 aaKnown RBP eCLIP16.31■□□□□ 0.22e-7■■■■■ 32.7
SGPP1-201ENST00000247225 ACAT2Q9BWD1 397 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 C1QTNF3Q9BXJ4 246 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 P2RY12Q9H244 342 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 SLC32A1Q9H598 525 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 TRPM5Q9NZQ8 1165 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 PCDHB1Q9Y5F3 818 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 OR2A25A4D2G3 310 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 TBKBP1A7MCY6 615 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 RPLP0P05388 317 aaKnown RBP16.3■□□□□ 0.2
SGPP1-201ENST00000247225 MC1RQ01726 317 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 ELP6Q0PNE2 266 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 NXNL2Q5VZ03 156 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 FRG2Q64ET8 278 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 PRSS48Q7RTY5 328 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 TSPYL5Q86VY4 417 aaPredicted RBP16.3■□□□□ 0.2
SGPP1-201ENST00000247225 LILRA3Q8N6C8 439 aaPredicted RBP16.3■□□□□ 0.2
SGPP1-201ENST00000247225 DTX3Q8N9I9 347 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 OR4A15Q8NGL6 344 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 TRNT1Q96Q11 434 aaKnown RBP16.3■□□□□ 0.2
SGPP1-201ENST00000247225 FRG2BQ96QU4 278 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 P2RY13Q9BPV8 354 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 SMG9Q9H0W8 520 aaKnown RBP16.3■□□□□ 0.2
SGPP1-201ENST00000247225 ZDHHC6Q9H6R6 413 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 FNIP2Q9P278 1114 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 PCDHGA6Q9Y5G7 932 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 ANXA4P09525 319 aaPredicted RBP16.3■□□□□ 0.2
SGPP1-201ENST00000247225 CCND3P30281 292 aaPredicted RBP16.3■□□□□ 0.2
SGPP1-201ENST00000247225 CLCN4P51793 760 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 DEFA1P59665 94 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 DEFA3P59666 94 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 RPS26P62854 115 aaKnown RBP16.3■□□□□ 0.2
SGPP1-201ENST00000247225 EXOC3L2Q2M3D2 409 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 FUT10Q6P4F1 479 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 NCEH1Q6PIU2 408 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 SLC24A5Q71RS6 500 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 CAMKK1Q8N5S9 505 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 ITPKCQ96DU7 683 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 OTUB1Q96FW1 271 aaPredicted RBP16.3■□□□□ 0.2
SGPP1-201ENST00000247225 TMEM161AQ9NX61 479 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 CLEC4EQ9ULY5 219 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 WDR90Q96KV7 1748 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 EFCAB10A6NFE3 127 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 PREPP48147 710 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 SLC11A1P49279 550 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 DUOXA1Q1HG43 343 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 COX20Q5RI15 118 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 ADGRF1Q5T601 910 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 PTCHD4Q6ZW05 846 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 NRARPQ7Z6K4 114 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 ZNF486Q96H40 463 aaPredicted RBP16.3■□□□□ 0.2
SGPP1-201ENST00000247225 DEPDC7Q96QD5 511 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 CCM2Q9BSQ5 444 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 PLSCR3Q9NRY6 295 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 DNAJC27Q9NZQ0 273 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 TMED5Q9Y3A6 229 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 ZNF236Q9UL36 1845 aa16.3■□□□□ 0.2
SGPP1-201ENST00000247225 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
SGPP1-201ENST00000247225 WNT9AO14904 365 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 SNX4O95219 450 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 PTNP21246 168 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 FLT3LGP49771 235 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 RAB25P57735 213 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 UGT8Q16880 541 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CPTPQ5TA50 214 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 ZZZ3Q8IYH5 903 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 APH1BQ8WW43 257 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 UROC1Q96N76 676 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 DUSP26Q9BV47 211 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 KLHL20Q9Y2M5 609 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 ILVBLA1L0T0 632 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 NPIPB15A6NHN6 443 aaPredicted RBP16.29■□□□□ 0.2
SGPP1-201ENST00000247225 PCDH17O14917 1159 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 C9P02748 559 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 TGFBR2P37173 567 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 STARD3Q14849 445 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 ZXDCQ2QGD7 858 aaPredicted RBP16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CCDC80Q76M96 950 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CELF5Q8N6W0 485 aaKnown RBP16.29■□□□□ 0.2
SGPP1-201ENST00000247225 NFKBIDQ8NI38 313 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 PHF10Q8WUB8 498 aaKnown RBP16.29■□□□□ 0.2
SGPP1-201ENST00000247225 MYDGFQ969H8 173 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CITED4Q96RK1 184 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CDADC1Q9BWV3 514 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 TOR4AQ9NXH8 423 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 PCDHGB6Q9Y5F9 930 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 C5orf42Q9H799 3197 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 PRRG1O14668 218 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 ZW10O43264 779 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 PRAMEF4O60810 478 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CD160O95971 181 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CHI3L1P36222 383 aaPredicted RBP16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CASP3P42574 277 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CD83Q01151 205 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 KCNC4Q03721 635 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CCSMST1Q4G0I0 132 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 MFSD4BQ5TF39 518 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 PRAMEF9Q5VWM5 478 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 TRAF7Q6Q0C0 670 aa16.29■□□□□ 0.2
SGPP1-201ENST00000247225 CCNB1IP1Q9NPC3 277 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms