RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 TBCDQ9BTW9 1192 aa22.39■■□□□ 1.17
MSX2-201ENST00000239243 DPPA5A6NC42 116 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 SCN2BO60939 215 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 EPN2O95208 641 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 RETP07949 1114 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 C7P10643 843 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 COL9A1P20849 921 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 RPL10P27635 214 aaKnown RBP22.38■■□□□ 1.17
MSX2-201ENST00000239243 WNT3P56703 355 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 SERPINA11Q86U17 422 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 FAM129CQ86XR2 697 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 LMNTD1Q8N9Z9 388 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 SNX19Q92543 992 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 SH3KBP1Q96B97 665 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 SIPA1Q96FS4 1042 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 CENPKQ9BS16 269 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 OSGEPL1Q9H4B0 414 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 BTNL2Q9UIR0 455 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 C7orf72A4D263 438 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 FAM149AA5PLN7 773 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 SAC3D1A6NKF1 404 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 SH3BGRLO75368 114 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 CEACAM5P06731 702 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 PTX3P26022 381 aaPredicted RBP22.38■■□□□ 1.17
MSX2-201ENST00000239243 CTBSQ01459 385 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 HKDC1Q2TB90 917 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 COMMD6Q7Z4G1 85 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 AURKBQ96GD4 344 aaPredicted RBP22.38■■□□□ 1.17
MSX2-201ENST00000239243 CNBD2Q96M20 576 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 AIF1LQ9BQI0 150 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 APOOQ9BUR5 198 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 PITHD1Q9GZP4 211 aaPredicted RBP22.38■■□□□ 1.17
MSX2-201ENST00000239243 TAC3Q9UHF0 121 aa22.38■■□□□ 1.17
MSX2-201ENST00000239243 CFAP20Q9Y6A4 193 aaKnown RBP22.38■■□□□ 1.17
MSX2-201ENST00000239243 SERPINB1P30740 379 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 GZMMP51124 257 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 SF1Q15637 639 aaKnown RBP22.37■■□□□ 1.17
MSX2-201ENST00000239243 R3HCC1LQ7Z5L2 792 aaKnown RBP22.37■■□□□ 1.17
MSX2-201ENST00000239243 MFSD2AQ8NA29 543 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 MIEF2Q96C03 454 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 COQ8BQ96D53 544 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 C12orf66Q96MD2 445 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 MENTQ9BUN1 341 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 RAB11FIP5Q9BXF6 653 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 SLC6A17Q9H1V8 727 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 WASH6PQ9NQA3 447 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 ATAD3AQ9NVI7 634 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 LIMD1Q9UGP4 676 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 RNF103-CHMP3A0A140T963 221 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 GABRR3A8MPY1 467 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 SOCS2O14508 198 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 DEAF1O75398 565 aaPredicted RBP22.37■■□□□ 1.17
MSX2-201ENST00000239243 TGFB1P01137 390 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 LAMP1P11279 417 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 MEF2AQ02078 507 aaPredicted RBP22.37■■□□□ 1.17
MSX2-201ENST00000239243 OR52E8Q6IFG1 317 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 SPRED1Q7Z699 444 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 METTL4Q8N3J2 472 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 CBR4Q8N4T8 237 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 NCLNQ969V3 563 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 FERD3LQ96RJ6 166 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 BTBD1Q9H0C5 482 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 SPNS1Q9H2V7 528 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 ATP6V1HQ9UI12 483 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 V9GYQ6 96 aa22.37■■□□□ 1.17
MSX2-201ENST00000239243 VGLL3A8MV65 326 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 CLIC1O00299 241 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 ACADMP11310 421 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 IDSP22304 550 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 PPIBP23284 216 aaKnown RBP22.36■■□□□ 1.17
MSX2-201ENST00000239243 COL19A1Q14993 1142 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 PYCR3Q53H96 274 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 FKBP9P1Q75LS8 142 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 ARMCX6Q7L4S7 300 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 DNASE1L2Q92874 299 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 ACAT2Q9BWD1 397 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 AHSPQ9NZD4 102 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 OAZ3Q9UMX2 235 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 AK5Q9Y6K8 562 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 COL4A2P08572 1712 aa22.36■■□□□ 1.17
MSX2-201ENST00000239243 CREG1O75629 220 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 B3GALT4O96024 378 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 FUCA1P04066 466 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 CCR8P51685 355 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 ERICH5Q6P6B1 374 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 ZNF621Q6ZSS3 439 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 EPHX4Q8IUS5 362 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 C2orf73Q8N5S3 287 aaPredicted RBP22.35■■□□□ 1.17
MSX2-201ENST00000239243 ABHD11Q8NFV4 315 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 INSM2Q96T92 566 aaPredicted RBP22.35■■□□□ 1.17
MSX2-201ENST00000239243 BHLHE41Q9C0J9 482 aaPredicted RBP22.35■■□□□ 1.17
MSX2-201ENST00000239243 RHBGQ9H310 441 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 OR51B5Q9H339 312 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 REEP4Q9H6H4 257 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 CORO2BQ9UQ03 480 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 REV3LO60673 3130 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 CLOCKO15516 846 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 RASAL1O95294 804 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 HOXC4P09017 264 aaPredicted RBP22.35■■□□□ 1.17
MSX2-201ENST00000239243 IL1RNP18510 177 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms