RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PIWIL3Q7Z3Z3 882 aaKnown RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 CLECL1Q8IZS7 167 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 SYNPOQ8N3V7 929 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 OR2T29Q8NH02 315 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 FBLIM1Q8WUP2 373 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 C12orf43Q96C57 262 aaKnown RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 OR2AG1Q9H205 316 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 CHST8Q9H2A9 424 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 DEC1Q9P2X7 70 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 CORO2BQ9UQ03 480 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 TSC22D4Q9Y3Q8 395 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 K7ESM1 405 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 RNASET2O00584 256 aaKnown RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 VEGFDO43915 354 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 CPSF4O95639 269 aaKnown RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 C1GALT1C1LP0DN25 315 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 C6P13671 934 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 ADRB3P13945 408 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 ACADLP28330 430 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 POLR2IP36954 125 aaKnown RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 HPCAL1P37235 193 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 VIPR2P41587 438 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 GPR1P46091 355 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 YAP1P46937 504 aaKnown RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 SLC6A11P48066 632 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 GABARAPL2P60520 117 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 RPS13P62277 151 aaKnown RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 TAP2Q03519 686 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 TOP3AQ13472 1001 aaPredicted RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 SKIV2LQ15477 1246 aaKnown RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 PAGE2BQ5JRK9 111 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 PDE12Q6L8Q7 609 aaKnown RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 CHDHQ8NE62 594 aaPredicted RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 GOT1L1Q8NHS2 421 aaPredicted RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 SH3KBP1Q96B97 665 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 NRBF2Q96F24 287 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 BHLHE41Q9C0J9 482 aaPredicted RBP15.59■□□□□ 0.09
UBE3D-201ENST00000237186 TMEM245Q9H330 911 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 VNN3Q9NY84 501 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 TMEM9Q9P0T7 183 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 CIDEBQ9UHD4 219 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 COQ6Q9Y2Z9 468 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 PDE4DIPQ5VU43 2346 aa15.58■□□□□ 0.09
UBE3D-201ENST00000237186 MGAT4DA6NG13 374 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 HS6ST1O60243 411 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 ABCB7O75027 752 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 PRKACGP22612 351 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 TUBA3CQ13748 450 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 SF1Q15637 639 aaKnown RBP15.58■□□□□ 0.08
UBE3D-201ENST00000237186 ZNF691Q5VV52 312 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 ANKRD34AQ69YU3 496 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 TMPRSS11BQ86T26 416 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 ZNF547Q8IVP9 402 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 NPAS3Q8IXF0 933 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 SYTL1Q8IYJ3 562 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 OR13F1Q8NGS4 319 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 OR2L2Q8NH16 312 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 ZFP90Q8TF47 636 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 SETD7Q8WTS6 366 aaKnown RBP15.58■□□□□ 0.08
UBE3D-201ENST00000237186 PPP1R16AQ96I34 528 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 ATXN10Q9UBB4 475 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 EBF1Q9UH73 591 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 CDC14AQ9UNH5 594 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 EXO1Q9UQ84 846 aaKnown RBP15.58■□□□□ 0.08
UBE3D-201ENST00000237186 DYRK1BQ9Y463 629 aa15.58■□□□□ 0.08
UBE3D-201ENST00000237186 B4GAT1O43505 415 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 POP7O75817 140 aaKnown RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 ZNF682O95780 498 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 HLA-EP13747 358 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 PBLDP30039 288 aaPredicted RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 CD47Q08722 323 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 GTF2H3Q13889 308 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 FNDC3BQ53EP0 1204 aaKnown RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 LRRC23Q53EV4 343 aaPredicted RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 CATSPEREQ5SY80 951 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 KDM4DQ6B0I6 523 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 RAET1GQ6H3X3 334 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 TMEM26Q6ZUK4 368 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 ERN2Q76MJ5 926 aaKnown RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 R3HCC1LQ7Z5L2 792 aaKnown RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 SPRED2Q7Z698 418 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 TRAPPC5Q8IUR0 188 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 PIK3C3Q8NEB9 887 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 SMG7Q92540 1137 aaKnown RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 LIN28AQ9H9Z2 209 aaKnown RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 ZNF282Q9UDV7 671 aaPredicted RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 BLOC1S6Q9UL45 172 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 ORC6Q9Y5N6 252 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 PCDH7O60245 1069 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 LZTS3O60299 673 aaPredicted RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 MMP20O60882 483 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 SEC14L2O76054 403 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 FABP3P05413 133 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 GSTM2P28161 218 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 DNAJA1P31689 397 aaKnown RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 ARHGDIAP52565 204 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 PPP1R8Q12972 351 aaKnown RBP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 PDE7AQ13946 482 aa15.57■□□□□ 0.08
UBE3D-201ENST00000237186 SLBPQ14493 270 aaKnown RBP eCLIP15.57■□□□□ 0.08
UBE3D-201ENST00000237186 RGNQ15493 299 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms