RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 TWIST2Q8WVJ9 160 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 REPS1Q96D71 796 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 TM4SF19Q96DZ7 209 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 THAP11Q96EK4 314 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 TCTN2Q96GX1 697 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 OR2A5Q96R48 311 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 GFM1Q96RP9 751 aaKnown RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 SIKE1Q9BRV8 207 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 ZNF768Q9H5H4 540 aaKnown RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 KCNK13Q9HB14 408 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 FAM60AQ9NP50 221 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 ENAMQ9NRM1 1142 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 MARCOQ9UEW3 520 aaPredicted RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 ADGRE2Q9UHX3 823 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 CCL27Q9Y4X3 112 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 USH1CQ9Y6N9 552 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 AP1M2Q9Y6Q5 423 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 IGHV5-10-1A0A0J9YXX1 117 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 D6RAR5 112 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 FFAR3O14843 346 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 GPR42O15529 346 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 OR1F1O43749 312 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 GFRA3O60609 400 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 CRCPO75575 148 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 CHEK2O96017 543 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 PDYNP01213 254 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 KITP10721 976 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 HSD3B1P14060 373 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 HSD3B2P26439 372 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 SERPINB1P30740 379 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 BCL6P41182 706 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 BTKQ06187 659 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 TRIP6Q15654 476 aaKnown RBP13.44□□□□□ -0.26
SEC61B-201ENST00000223641 XKR7Q5GH72 579 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 ADNP2Q6IQ32 1131 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 EPGNQ6UW88 154 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 Q6ZSR9 355 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 ADCK2Q7Z695 626 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 PLD3Q8IV08 490 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 D2HGDHQ8N465 521 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 MFSD9Q8NBP5 474 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 TTLQ8NG68 377 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 HUS1BQ8NHY5 278 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 CREB3L4Q8TEY5 395 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 SELENOMQ8WWX9 145 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 MAELQ96JY0 434 aaKnown RBP13.44□□□□□ -0.26
SEC61B-201ENST00000223641 ZNF285Q96NJ3 590 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 ZFYVE21Q9BQ24 234 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 TRIM55Q9BYV6 548 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 KLHL25Q9H0H3 589 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 ELOVL6Q9H5J4 265 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 MEAF6Q9HAF1 191 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 BRF2Q9HAW0 419 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 FARSBQ9NSD9 589 aaKnown RBP13.44□□□□□ -0.26
SEC61B-201ENST00000223641 ZFP69BQ9UJL9 534 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 FIS1Q9Y3D6 152 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 FAM186AA6NE01 2351 aa13.44□□□□□ -0.26
SEC61B-201ENST00000223641 GVINP1Q7Z2Y8 2422 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 PIP5K1BO14986 540 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 HCRTR1O43613 425 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 CLEC3AO75596 197 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 RFPL3O75679 317 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 RASSF9O75901 435 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 FAM107AO95990 144 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 TROVE2P10155 538 aaKnown RBP eCLIP13.43□□□□□ -0.26
SEC61B-201ENST00000223641 CDK4P11802 303 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 NELFEP18615 380 aaKnown RBP13.43□□□□□ -0.26
SEC61B-201ENST00000223641 PPM1FP49593 454 aaPredicted RBP13.43□□□□□ -0.26
SEC61B-201ENST00000223641 NEK2P51955 445 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 PDX1P52945 283 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 HSD11B2P80365 405 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 CSTF3Q12996 717 aaKnown RBP13.43□□□□□ -0.26
SEC61B-201ENST00000223641 IFT88Q13099 833 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 TRA2AQ13595 282 aaKnown RBP eCLIP13.43□□□□□ -0.26
SEC61B-201ENST00000223641 SPIDRQ14159 915 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 RBBP5Q15291 538 aaKnown RBP13.43□□□□□ -0.26
SEC61B-201ENST00000223641 CDCP2Q5VXM1 449 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 VN1R4Q7Z5H5 301 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 PIGWQ7Z7B1 504 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.43□□□□□ -0.26
SEC61B-201ENST00000223641 TBC1D19Q8N5T2 526 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 GBP7Q8N8V2 638 aaPredicted RBP13.43□□□□□ -0.26
SEC61B-201ENST00000223641 DEFB124Q8NES8 71 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 TRPV3Q8NET8 790 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 C19orf60Q96EN9 201 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 C3orf30Q96M34 536 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 NUF2Q9BZD4 464 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 NSRP1Q9H0G5 558 aaKnown RBP13.43□□□□□ -0.26
SEC61B-201ENST00000223641 PDE7BQ9NP56 450 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 DMRT3Q9NQL9 472 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 KLHL14Q9P2G3 628 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 KLHL3Q9UH77 587 aa13.43□□□□□ -0.26
SEC61B-201ENST00000223641 DMXL1Q9Y485 3027 aa13.42□□□□□ -0.26
SEC61B-201ENST00000223641 ANKDD1BA6NHY2 528 aa13.42□□□□□ -0.26
SEC61B-201ENST00000223641 TRPC5OSA6NMA1 111 aa13.42□□□□□ -0.26
SEC61B-201ENST00000223641 MAGEB17A8MXT2 336 aa13.42□□□□□ -0.26
SEC61B-201ENST00000223641 H3BMH7 237 aa13.42□□□□□ -0.26
SEC61B-201ENST00000223641 SDHDO14521 159 aa13.42□□□□□ -0.26
SEC61B-201ENST00000223641 SLC30A4O14863 429 aa13.42□□□□□ -0.26
SEC61B-201ENST00000223641 SNX3O60493 162 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms