RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 GPC1P35052 558 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 GATMP50440 423 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 MAXP61244 160 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 SLC10A7Q0GE19 358 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 IHHQ14623 411 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 QPRTQ15274 297 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 FLYWCH1Q4VC44 716 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 ALG1LQ6GMV1 187 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 B3GNT8Q7Z7M8 397 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 KRT73Q86Y46 540 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 CEP97Q8IW35 865 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 RIMKLAQ8IXN7 391 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 CLRN3Q8NCR9 226 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 FBLIM1Q8WUP2 373 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 IGSF8Q969P0 613 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 KLHL5Q96PQ7 755 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 TBCDQ9BTW9 1192 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 APOL5Q9BWW9 433 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 ZYG11BQ9C0D3 744 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 MS4A7Q9GZW8 240 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-201ENST00000220429 ABCG4Q9H172 646 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 CRISPLD1Q9H336 500 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 NT5MQ9NPB1 228 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 CATSPERZQ9NTU4 200 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 TMEM248Q9NWD8 314 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 TMEM161AQ9NX61 479 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 HCSTQ9UBK5 93 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 FIS1Q9Y3D6 152 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 A0A0A6YYJ9 748 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 HNRNPCL2B2RXH8 293 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TSPAN12O95859 305 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 RAF1P04049 648 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 FABP1P07148 127 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 YWHAQP27348 245 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TNFSF8P32971 234 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 SOX6P35712 828 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 GLRBP48167 497 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 YBX1P67809 324 aaKnown RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 SCN1BQ07699 218 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 ASAH1Q13510 395 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 ZMAT1Q5H9K5 638 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TRILQ7L0X0 811 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 SNX20Q7Z614 316 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 MIB1Q86YT6 1006 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 OR52N1Q8NH53 320 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 FBXO32Q969P5 355 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 PDLIM5Q96HC4 596 aaKnown RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 HHIPL1Q96JK4 782 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TSR3Q9UJK0 312 aaKnown RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 SPATA2Q9UM82 520 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 RUVBL2Q9Y230 463 aaKnown RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 CHD5Q8TDI0 1954 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 IGLV3-10A0A075B6K4 115 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 FAM95CA0A1B0GW59 222 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 A0A1W2PP18 115 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 UBXN8O00124 270 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 CSF2P04141 144 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 GSK3BP49841 420 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 CLCNKAP51800 687 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TSC22D1Q15714 1073 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 GPR19Q15760 415 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TATDN3Q17R31 274 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 ZNF470Q6ECI4 717 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 KIAA0930Q6ICG6 404 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 FBXL22Q6P050 247 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 RSPO2Q6UXX9 243 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 PTRH1Q86Y79 214 aaKnown RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 FUNDC1Q8IVP5 155 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 C2CD4AQ8NCU7 369 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 ZNF540Q8NDQ6 660 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 IMP4Q96G21 291 aaKnown RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 Q96MT0 163 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 ATP13A1Q9HD20 1204 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 LOC100506127A0A0U1RQW1 187 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TARM1B6A8C7 271 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 PDE9AO76083 593 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 VNN2O95498 520 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 MMP2P08253 660 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 HMBSP08397 361 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 SLC2A4P14672 509 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 CSKP41240 450 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 RENBPP51606 427 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 RAB10P61026 200 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 RAB14P61106 215 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TAF10Q12962 218 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 SPATS1Q496A3 300 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 HSD17B12Q53GQ0 312 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 LHX8Q68G74 356 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 FSTL5Q8N475 847 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 CD99L2Q8TCZ2 262 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 STYXQ8WUJ0 223 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 SLC5A11Q8WWX8 675 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 PSMG2Q969U7 264 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TUBGCP3Q96CW5 907 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 PABPC5Q96DU9 382 aaKnown RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TRIM8Q9BZR9 551 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 ALG2Q9H553 416 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TRIM45Q9H8W5 580 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-201ENST00000220429 ARNT2Q9HBZ2 717 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 STARD7Q9NQZ5 370 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms