RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 WDR45Q9Y484 360 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 ATG2BQ96BY7 2078 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 RIC1Q4ADV7 1423 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 HOXC6P09630 235 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 FASLGP48023 281 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 CCL23P55773 120 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 TMEM164Q5U3C3 297 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 TMPPEQ6ZT21 453 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 CHPT1Q8WUD6 406 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 CDK5RAP2Q96SN8 1893 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 NT5C1B-RDH14C9J2C7 533 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 FGF19O95750 216 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 HMGN1P05114 100 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 SERPINA7P05543 415 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 CDH1P12830 882 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 MRPS5P82675 430 aaKnown RBP14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 HSPBAP1Q96EW2 488 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 PLA2G12BQ9BX93 195 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 PORCNQ9H237 461 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 ENAMQ9NRM1 1142 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 YDJCA8MPS7 323 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 ZNF8P17098 575 aaPredicted RBP14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 CHRNA4P43681 627 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 MARCKSL1P49006 195 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 CAMLGP49069 296 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 SNTA1Q13424 505 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 BEST3Q8N1M1 668 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 METTL25Q8N6Q8 603 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 C3orf58Q8NDZ4 430 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 KLK6Q92876 244 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 CRTAC1Q9NQ79 661 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 LRRN3E7EW58 273 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 EDF1O60869 148 aaKnown RBP14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 RHDQ02161 417 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 GPR149Q86SP6 731 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 C9orf43Q8TAL5 461 aaPredicted RBP14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 BTN2A3PQ96KV6 586 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 LRRN3Q9H3W5 708 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 PLEKHM1Q9Y4G2 1056 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 BACE2Q9Y5Z0 518 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 CDH10Q9Y6N8 788 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 TGFB2P61812 414 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 TLE1Q04724 770 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 NTRK3Q16288 839 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 TAS1R3Q7RTX0 852 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 COL21A1Q96P44 957 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 TLE6Q9H808 572 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 ANKHQ9HCJ1 492 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 FLRT1Q9NZU1 646 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 PCDHB14Q9Y5E9 798 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 CD3GP09693 182 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 LRRC73Q5JTD7 316 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 VSTM1Q6UX27 236 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 VASH1Q7L8A9 365 aaPredicted RBP14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 LRRC46Q96FV0 321 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 SLC25A44Q96H78 314 aaPredicted RBP14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 RRAGCQ9HB90 399 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 DEC1Q9P2X7 70 aa14.23□□□□□ -0.13
SPTLC2-201ENST00000216484 DUXAA6NLW8 204 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 EI24O14681 340 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 BCHEP06276 602 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 PSPHP78330 225 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 CNTN2Q02246 1040 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 TGFB1P01137 390 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 CD72P21854 359 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 EEF1A2Q05639 463 aaKnown RBP14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 NLGN2Q8NFZ4 835 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 OR7G2Q8NG99 324 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 COPS5Q92905 334 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 ARHGAP9Q9BRR9 750 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 DUS2Q9NX74 493 aaKnown RBP14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 PCDH7O60245 1069 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 AKR1C4P17516 323 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 RAB15P59190 212 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 RPS3AP61247 264 aaKnown RBP14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 SLC15A3Q8IY34 581 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 GCM1Q9NP62 436 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 OAZ3Q9UMX2 235 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 SCN1AP35498 2009 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 A0A0G2JN53 185 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 TISP43B9A030 160 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 PDLIM1O00151 329 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 PNLIPRP1P54315 467 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 TAS2R39P59534 338 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 RALGPS1Q5JS13 557 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 RGMAQ96B86 450 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 BSCL2Q96G97 398 aaPredicted RBP14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 DUSP26Q9BV47 211 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 GPATCH2Q9NW75 528 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 ARL6IP5O75915 188 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 H1F0P07305 194 aaKnown RBP14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 CD97P48960 835 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 NUDT6P53370 316 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 ACTR1AP61163 376 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 CFAP77Q6ZQR2 320 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 TMPRSS7Q7RTY8 843 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 SLC44A1Q8WWI5 657 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 HERVK_113Q902F9 699 aa14.22□□□□□ -0.13
SPTLC2-201ENST00000216484 GAS2L1Q99501 681 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms