RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TMEM115Q12893 351 aaPredicted RBP12.69□□□□□ -0.38
CTNS-201ENST00000046640 TUBA3CQ13748 450 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 IER5LQ5T953 404 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 LAIR1Q6GTX8 287 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 FAM180BQ6P0A1 224 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 ANGPTL8Q6UXH0 198 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 PRR23BQ6ZRT6 265 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 VTCN1Q7Z7D3 282 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 ADHFE1Q8IWW8 467 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 MUL1Q969V5 352 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 SH3KBP1Q96B97 665 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 CMTM7Q96FZ5 175 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 ZNF347Q96SE7 839 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 SH3GL1Q99961 368 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 CPPED1Q9BRF8 314 aaPredicted RBP12.69□□□□□ -0.38
CTNS-201ENST00000046640 CEP44Q9C0F1 390 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 KCNH6Q9H252 994 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 RMND5AQ9H871 391 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 SGK2Q9HBY8 427 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 C3orf18Q9UK00 162 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 GRXCR2A6NFK2 248 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 TRIM64BA6NI03 449 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 KPNA4O00629 521 aaPredicted RBP12.68□□□□□ -0.38
CTNS-201ENST00000046640 MYOGP15173 224 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 PTPN6P29350 595 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 HOXD12P35452 270 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 HNMTP50135 292 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 ZNF846Q147U1 533 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 STARD3Q14849 445 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 HKDC1Q2TB90 917 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 PLEKHS1Q5SXH7 462 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 CEP68Q76N32 757 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 CYP4Z1Q86W10 505 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 CFAP206Q8IYR0 622 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 FAR1Q8WVX9 515 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 SLX1AQ9BQ83 275 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 CRISPLD2Q9H0B8 497 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 C11orf49Q9H6J7 331 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 AMBNQ9NP70 447 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 DCAF13Q9NV06 445 aaKnown RBP12.68□□□□□ -0.38
CTNS-201ENST00000046640 THG1LQ9NWX6 298 aaKnown RBP12.68□□□□□ -0.38
CTNS-201ENST00000046640 ABCG2Q9UNQ0 655 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 TRBV5-3A0A0A0MS03 114 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 NUDT7P0C024 238 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 JUPP14923 745 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 IGFBP5P24593 272 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 ACSM2AQ08AH3 577 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 UGT8Q16880 541 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 HENMT1Q5T8I9 393 aaKnown RBP12.68□□□□□ -0.38
CTNS-201ENST00000046640 ACSM2BQ68CK6 577 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 PARS2Q7L3T8 475 aaKnown RBP12.68□□□□□ -0.38
CTNS-201ENST00000046640 PAGE2Q7Z2X7 111 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 TRAPPC5Q8IUR0 188 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 SYTL1Q8IYJ3 562 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 ZCCHC7Q8N3Z6 543 aaKnown RBP12.68□□□□□ -0.38
CTNS-201ENST00000046640 C1orf52Q8N6N3 182 aaKnown RBP12.68□□□□□ -0.38
CTNS-201ENST00000046640 L3MBTL4Q8NA19 623 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 ZNF540Q8NDQ6 660 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 PSD4Q8NDX1 1056 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 PSMA8Q8TAA3 256 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 BTN2A2Q8WVV5 523 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 MAL2Q969L2 176 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 PKP4Q99569 1192 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 KLHL25Q9H0H3 589 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 HMG20AQ9NP66 347 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 TMEM45AQ9NWC5 275 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 STOX2Q9P2F5 926 aaPredicted RBP12.68□□□□□ -0.38
CTNS-201ENST00000046640 VPS29Q9UBQ0 182 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 TMEFF2Q9UIK5 374 aaPredicted RBP12.68□□□□□ -0.38
CTNS-201ENST00000046640 EYSQ5T1H1 3165 aa12.68□□□□□ -0.38
CTNS-201ENST00000046640 A0A096LPI6 279 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 CLIC1O00299 241 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 UGT2B11O75310 529 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 ERN1O75460 977 aaKnown RBP12.67□□□□□ -0.38
CTNS-201ENST00000046640 PRPS2P11908 318 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 PCMT1P22061 227 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 SLC6A11P48066 632 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 GBX1Q14549 363 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 DHCR24Q15392 516 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 ZNF77Q15935 545 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 SYT16Q17RD7 645 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 CATSPEREQ5SY80 951 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 ZNF691Q5VV52 312 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 LIPIQ6XZB0 460 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 TMPRSS11BQ86T26 416 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 ZDHHC21Q8IVQ6 265 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 CADM3Q8N126 398 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 OR5K1Q8NHB7 308 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 GLYATL1Q969I3 302 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 NXPE3Q969Y0 559 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 CCDC115Q96NT0 180 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 OR2AG1Q9H205 316 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 SH3BP4Q9P0V3 963 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 ZNF229Q9UJW7 825 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 SH2B3Q9UQQ2 575 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 MYO9BQ13459 2157 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 GNG14A0A1W2PPG7 69 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 TLL1O43897 1013 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 SCELO95171 688 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms