RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Slitrk6Q8C110 840 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Hdac7Q8C2B3 938 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ccm2Q8K2Y9 453 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Spag16Q8K450 639 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr357Q8VFP4 308 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Usb1Q91W78 267 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pcdhga6Q91XY2 932 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Exosc7Q9D0M0 291 aaKnown RBP6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ccdc3Q9D6Y1 273 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Wnk2Q3UH66 2149 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Dmxl1Q6PNC0 3013 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 CerklA2AQH1 525 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gm6619F6URP1 175 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vmn2r13L7N1X2 831 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr603L7N1Y4 312 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pld3O35405 488 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cntn1P12960 1020 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Atxn1P54254 791 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Eif4ebp2P70445 120 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 UrodP70697 367 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 TigitP86176 249 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rbm15Q0VBL3 962 aaKnown RBP6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Slc17a7Q3TXX4 560 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 MybphlQ5FW53 355 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Eif1aQ60872 144 aaKnown RBP6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Nxph1Q61200 271 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 DgkbQ6NS52 802 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ubxn7Q6P5G6 467 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Q80WR5 230 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Klhl31Q8BWA5 634 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Zfp263Q8CF60 680 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Smyd2Q8R5A0 433 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Sec16bQ91XT4 1051 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tmem246Q91YV9 403 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 SelenosQ9BCZ4 190 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 MydgfQ9CPT4 166 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Glod4Q9CPV4 298 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rex1bdQ9CYZ6 169 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 MtpapQ9D0D3 585 aaKnown RBP6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 EbplQ9D0P0 206 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Q9D5Y0 588 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Orc6Q9WUJ8 262 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Eif2s3yQ9Z0N2 472 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Igkv12-46A0A140T8P6 115 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tox2A2A472 547 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ttc39aA2ACP1 578 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 4931406B18RikA2RSL7 367 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Fam71f2B2RXB0 297 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Dnmt3cP0DOY1 709 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Krt6aP50446 553 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Atp6v1e1P50518 226 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 CartptP56388 129 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Btbd3P58545 530 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 ErgP81270 486 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Smad5P97454 465 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Atf4Q06507 349 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gm8773Q3UQ24 132 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Coq8aQ60936 645 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Lpcat4Q6NVG1 524 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Fbxo42Q6PDJ6 717 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Trpm4Q7TN37 1213 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 DdnQ80TS7 710 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Mfn2Q80U63 757 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 AasdhQ80WC9 1100 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Teddm1aQ810U2 305 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Slc25a24Q8BMD8 475 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Snx16Q8C080 344 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rab36Q8CAM5 267 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Far1Q922J9 515 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Srfbp1Q9CZ91 441 aaKnown RBP6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Commd8Q9CZG3 183 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tmem30cQ9D4D7 342 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Aldh7a1Q9DBF1 539 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Uba7Q9DBK7 977 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ndufs3Q9DCT2 263 aaKnown RBP6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr705Q9EPF7 316 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 DiabloQ9JIQ3 237 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Zbtb18Q9WUK6 522 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Carm1Q9WVG6 608 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Dyrk1bQ9Z188 629 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Fam155bA2BDP1 471 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cdh19E9Q3A7 770 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Srp72F8VQC1 671 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vmn2r12L7N217 831 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Klc2O88448 599 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 P01740 135 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 CryabP23927 175 aaKnown RBP6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 CtnsP57757 367 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Adra1bP97717 514 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Lpar5Q149R9 372 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Lin28bQ45KJ6 247 aaKnown RBP6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Plk4Q64702 925 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Doxl2Q6IMK7 723 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Man1c1Q6NXK9 625 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Fbxl19Q6PB97 674 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Scgb2b2Q6UGQ3 114 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Sdr16c5Q7TQA3 309 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Kirrel1Q80W68 789 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Arhgap28Q8BN58 729 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Esrp2Q8K0G8 717 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms