RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ints11Q9CWS4 600 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Maf1Q9D0U6 258 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Tex22Q9D9U4 189 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dap3Q9ER88 391 aaKnown RBP10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dock5B2RY04 1868 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 NynrinQ5DTZ0 1840 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cylc1A0A1B0GR13 642 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm2956E9PVJ0 216 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm5796E9Q7M8 205 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm3629K7N6Y2 205 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm10340K7N708 205 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm8108K7N734 216 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm3159K7N760 267 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sypl1O09117 261 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 ItgamP05555 1153 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Tcea1P10711 301 aaKnown RBP10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Pmp22P16646 161 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 SmoP56726 793 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Lpcat1Q3TFD2 534 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Zfp78Q5U406 512 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 PtprcapQ64697 197 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gpr20Q8BYC4 358 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Mettl3Q8C3P7 580 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rbm4Q8C7Q4 361 aaKnown RBP10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rbm4bQ8VE92 357 aaKnown RBP10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cdkal1Q91WE6 578 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Elmod3Q91YP6 381 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 AdprmQ99KS6 340 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Mgrn1Q9D074 532 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cntd1Q9D995 334 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sertad3Q9ERC3 197 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Khdrbs3Q9R226 346 aaKnown RBP10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fiz1Q9WTJ4 500 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 A0A286YCD0 109 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 4932443I19RikA0A286YE38 169 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Kctd17E0CYQ0 296 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Smad6O35182 495 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gh1P06880 216 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Pcmt1P23506 227 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Nckap1P28660 1128 aaKnown RBP10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Nat2P50295 290 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Hdac2P70288 488 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sox4Q06831 440 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr616Q3KPB0 317 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Alg6Q3TAE8 507 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 RogdiQ3TDK6 287 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 PmlQ60953 885 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cox8aQ64445 69 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Lix1Q6P566 282 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rbm11Q80YT9 238 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Slc9a7Q8BLV3 726 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Plekhs1Q8BW88 474 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cers6Q8C172 384 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Slc35e2Q8C811 405 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Crlf2Q8CII9 359 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Bloc1s5Q8R015 185 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Mptx1Q8R1M8 219 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr315Q8VFG7 309 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Acsm1Q91VA0 573 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dhrs4Q99LB2 279 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 AasdhpptQ9CQF6 309 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Atg7Q9D906 698 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Zbtb32Q9JKD9 465 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Plod2Q9R0B9 737 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Nme4Q9WV84 186 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 HnrnpdlQ9Z130 301 aaKnown RBP10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Vmn1r238E9Q373 306 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Tsga10ipF7A1F0 157 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 TpmtO55060 240 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ufm1P61961 85 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 NfycP70353 335 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Slc30a3P97441 388 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Bcl2a1Q07440 172 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Itgb8Q0VBD0 767 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Usp22Q5DU02 525 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ptx4Q6RUU0 478 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr1085Q7TR64 313 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Clrn3Q8BHH8 226 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 AcmsdQ8R519 336 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cyp4f15Q99N18 534 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Riok2Q9CQS5 547 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Wdr53Q9DB94 358 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Tmem8aQ9ESN3 769 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Il20Q9JKV9 176 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dock8Q8C147 2100 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm14459A2BI73 179 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Pld3O35405 488 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gp1baO35930 734 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 FxnO35943 207 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 P06324 132 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 TP20293 436 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Q3UST5 385 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sel1l2Q3V172 688 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fgfr3Q61851 801 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Paqr3Q6TCG8 311 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Med26Q7TN02 588 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr735Q7TRM4 354 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fam109aQ8BH49 266 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Slc6a17Q8BJI1 727 aa10.56□□□□□ -0.72
Msh3-201ENSMUST00000022220 Shc2Q8BMC3 573 aa10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms