RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Phf10Q9D8M7 497 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 SgshQ9EQ08 502 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ing1Q9QXV3 279 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Numa1E9Q7G0 2094 aaKnown RBP12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Rpl9-ps6A0A140T8T4 192 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm21731A0A286YDE9 180 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gh1P06880 216 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tead2P48301 445 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 EdnrbP48302 442 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Rpl9P51410 192 aaKnown RBP12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 InipQ3TXT3 104 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Slc16a10Q3U9N9 512 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Slc10a7Q5PT53 340 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Kir3dl2Q673W2 388 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Colgalt2Q6NVG7 625 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ints6Q6PCM2 883 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dsg4Q7TMD7 1041 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1036Q7TR85 310 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr834Q7TRG8 312 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dpep2Q8C255 478 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Asz1Q8VD46 475 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Usp3Q91W36 520 aaKnown RBP12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Prps2Q9CS42 318 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Wdr89Q9D0R9 386 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ndufaf4Q9D1H6 173 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Nme7Q9QXL8 395 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Hspb3Q9QZ57 154 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Serinc3Q9QZI9 472 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Chrna6Q9R0W9 494 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Kat6aQ8BZ21 2003 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 NrapQ80XB4 1728 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 RttnQ8R4Y8 2226 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cilp2D3Z7H8 1162 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vmn2r85G3UW56 850 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Prl7a1O54830 266 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gjd2O54851 321 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tp63O88898 680 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Id2P41136 134 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zfp39Q02525 718 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Scrn3Q3TMH2 418 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zmym5Q3U2E2 627 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Lmf1Q3U3R4 574 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Prrt3Q6PE13 971 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Q810M1 233 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Aldh9a1Q9JLJ2 494 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm28897A0A087WP44 222 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 C7D3YXF5 845 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm3149E9PW52 257 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vmn1r12G5E8G1 307 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm8362K7N6Y6 257 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Stfa2P35174 103 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Snrpd2P62317 118 aaKnown RBP12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Fastkd5Q7TMV3 762 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Lrrc75bQ7TPD7 306 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Arhgap19Q8BRH3 494 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Slc41a2Q8BYR8 573 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tmem259Q8CIV2 574 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Snx7Q9CY18 387 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 CenpnQ9CZW2 337 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 D10Jhu81eQ9D172 266 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Epb41l4bQ9JMC8 527 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Fiz1Q9WTJ4 500 aa12.39□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Xlr5aA2BI45 236 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm8229K7N749 213 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm3159K7N760 267 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Sh3yl1O08641 340 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Slc6a2O55192 617 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ldb2O55203 373 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 TstP52196 297 aaKnown RBP12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dppa5bP85965 119 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 StradaQ3UUJ4 431 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr381Q5SSP0 311 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mgat5bQ765H6 792 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dnajc15Q78YY6 149 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ap1s3Q7TN05 154 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1418Q7TQS3 318 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zfp438Q8BFX2 798 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 PgghgQ8BP56 690 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cers6Q8C172 384 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ly6g5cQ8K1T5 149 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Polr1eQ8K202 482 aaKnown RBP12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm7945F6QI24 236 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 TspearJ3S6Y1 670 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr694K7N641 315 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Pmp22P16646 161 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Kcnk2P97438 426 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Glb1l2Q3UPY5 636 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ankrd42Q3V096 527 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Itga7Q61738 1179 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Q922R1 422 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mri1Q9CQT1 369 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Uqcrc2Q9DB77 453 aaKnown RBP12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm13078A2AGW8 474 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm14147A2AQX6 640 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zfp992B1ASD8 573 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr376E9Q4M1 320 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mapk12O08911 367 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cyp4a14O35728 507 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Slc22a2O70577 553 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Htr3aP23979 487 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms