RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZNF81P51508 661 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CLCNKBP51801 687 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 OR2B6P58173 313 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 GTF2BQ00403 316 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 IRF5Q13568 498 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CNKSR3Q6P9H4 555 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 OR8S1Q8NH09 359 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TBC1D15Q8TC07 691 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 NR4A3Q92570 626 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ARMC5Q96C12 935 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 MMABQ96EY8 250 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 RPL10LQ96L21 214 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 AGAP2Q99490 1192 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 FAM124BQ9H5Z6 455 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 XKR8Q9H6D3 395 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TIMMDC1Q9NPL8 285 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CNTN3Q9P232 1028 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TNFRSF10DQ9UBN6 386 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ABCG2Q9UNQ0 655 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TLL2Q9Y6L7 1015 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ZC3H13Q5T200 1668 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 UNC5CO95185 931 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 SLC34A2O95436 690 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 UGT2B10P36537 528 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CREB5Q02930 508 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 HYAL2Q12891 473 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ASTE1Q2TB18 679 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 HGSNATQ68CP4 663 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TNFAIP8L2Q6P589 184 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ANKRD46Q86W74 232 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ZDHHC21Q8IVQ6 265 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF283Q8N7M2 679 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF610Q8N9Z0 462 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CYP2S1Q96SQ9 504 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 PCDHB18PQ96TA0 734 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 SLC35A5Q9BS91 424 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 PAPOLGQ9BWT3 736 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 KCNF1Q9H3M0 494 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ARHGAP20Q9P2F6 1191 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 PRODH2Q9UF12 536 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 C15orf41Q9Y2V0 281 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 MYO18AQ92614 2054 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 GGT3PA6NGU5 568 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 FAM155AB1AL88 458 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 MAN2B1O00754 1011 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 GOT2P00505 430 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 YAP1P46937 504 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ERVK-16P61578 105 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 RRAS2P62070 204 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 LCP2Q13094 533 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 SEMA3AQ14563 771 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 NPTX1Q15818 432 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 OLFML1Q6UWY5 402 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ZYG11AQ6WRX3 759 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ABHD12BQ7Z5M8 362 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 COMTD1Q86VU5 262 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 MREGQ8N565 214 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 IL17RCQ8NAC3 791 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 SH3RF2Q8TEC5 729 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 GEMIN6Q8WXD5 167 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 RAB39BQ96DA2 213 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 DUSP26Q9BV47 211 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CHST7Q9NS84 486 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TAS2R9Q9NYW1 312 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 H3BNX3 289 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 EML1O00423 815 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TREHO43280 583 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ERI3O43414 337 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 PFKMP08237 780 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TNFSF9P41273 254 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 MAN2A2P49641 1150 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CLCNKAP51800 687 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 SLC36A3Q495N2 470 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CLEC12AQ5QGZ9 265 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 GPR139Q6DWJ6 353 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ISLR2Q6UXK2 745 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 NLGN2Q8NFZ4 835 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CD300LFQ8TDQ1 290 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 FAM83CQ9BQN1 747 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 POLR2J3Q9H1A7 115 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 RNPEPL1Q9HAU8 725 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 HIF1ANQ9NWT6 349 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 MAGED1Q9Y5V3 778 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 SQORQ9Y6N5 450 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 DIP2AQ14689 1571 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 MATN3O15232 486 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 GNAO1P09471 354 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ACRP10323 421 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TPSB2P20231 275 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 GGT2P36268 569 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 DCDC1P59894 354 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TPSAB1Q15661 275 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 RAET1LQ5VY80 246 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 GK5Q6ZS86 529 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 FAM71AQ8IYT1 594 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 MSI2Q96DH6 328 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 YIPF4Q9BSR8 244 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 MYNNQ9NPC7 610 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 NGBQ9NPG2 151 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms