RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 ABHD11Q8NFV4 315 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 OR4F6Q8NGB9 312 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 OR6Y1Q8NGX8 325 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 RAB3IL1Q8TBN0 382 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 LRRC8CQ8TDW0 803 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 AGAP11Q8TF27 550 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 CKAP2Q8WWK9 683 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ZNF75CPQ92670 426 aaPredicted RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 WDR34Q96EX3 536 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PTCD3Q96EY7 689 aaKnown RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 TCTN2Q96GX1 697 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PRR11Q96HE9 360 aaPredicted RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 MAGEB18Q96M61 343 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 TMEM74Q96NL1 305 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ZNF382Q96SR6 550 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 AIF1LQ9BQI0 150 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PLCD4Q9BRC7 762 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 TRMOQ9BU70 441 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 EFCAB11Q9BUY7 163 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 NTMT1Q9BV86 223 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 DRC3Q9H069 523 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 SPNS1Q9H2V7 528 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 MANSC1Q9H8J5 431 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ZNF395Q9H8N7 513 aaPredicted RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 EML4Q9HC35 981 aaKnown RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PRM3Q9NNZ6 103 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PDE7BQ9NP56 450 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 GEMIN8Q9NWZ8 242 aaKnown RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PLA2G2EQ9NZK7 142 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PDP2Q9P2J9 529 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ANKMY1Q9P2S6 941 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 STK38LQ9Y2H1 464 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 RNF11Q9Y3C5 154 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 CFAP54Q96N23 3096 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 MDC1Q14676 2089 aaKnown RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 A0A0J9YVX5 310 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 OR2A25A4D2G3 310 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 PCNX2A6NKB5 2137 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 FFAR3O14843 346 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 GPR42O15529 346 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 ITM2AO43736 263 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 OR1F1O43749 312 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 UGDHO60701 494 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 CTSVO60911 334 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 CSO75390 466 aaKnown RBP8.16□□□□□ -1.1
SGMS1-211ENST00000626236 CRCPO75575 148 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 WFS1O76024 890 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 DKK1O94907 266 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 OR4F21O95013 312 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 ESRRBO95718 433 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 ANKRD34CP0C6C1 535 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 PCNAP12004 261 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 HGFP14210 728 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 JUPP14923 745 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 EZRP15311 586 aaKnown RBP8.16□□□□□ -1.1
SGMS1-211ENST00000626236 NELFEP18615 380 aaKnown RBP8.16□□□□□ -1.1
SGMS1-211ENST00000626236 CD22P20273 847 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 CXCR2P25025 360 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 ARRB2P32121 409 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 HNF4AP41235 474 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 CASP2P42575 452 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 GYS2P54840 703 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 SH3BP2P78314 561 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 ZFP36L1Q07352 338 aaKnown RBP8.16□□□□□ -1.1
SGMS1-211ENST00000626236 PCDH1Q08174 1060 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 CYP4F3Q08477 520 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 LAPTM5Q13571 262 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 TRA2AQ13595 282 aaKnown RBP eCLIP8.16□□□□□ -1.1
SGMS1-211ENST00000626236 KCNAB1Q14722 419 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 C16orf72Q14CZ0 275 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 RBBP5Q15291 538 aaKnown RBP8.16□□□□□ -1.1
SGMS1-211ENST00000626236 TBCCQ15814 346 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 CPSF6Q16630 551 aaKnown RBP eCLIP8.16□□□□□ -1.1
SGMS1-211ENST00000626236 DEFB110Q30KQ9 67 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 PAGE2BQ5JRK9 111 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 TMTC4Q5T4D3 741 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 FAM219BQ5XKK7 198 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 TTC19Q6DKK2 380 aaPredicted RBP8.16□□□□□ -1.1
SGMS1-211ENST00000626236 GRHL2Q6ISB3 625 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 LETMD1Q6P1Q0 360 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 ATG14Q6ZNE5 492 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 ARHGAP22Q7Z5H3 698 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 KMT5CQ86Y97 462 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 KRT78Q8N1N4 520 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 D2HGDHQ8N465 521 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 TBC1D19Q8N5T2 526 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 CDYL2Q8N8U2 506 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 L3MBTL4Q8NA19 623 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 ZNF740Q8NDX6 193 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 OR4K1Q8NGD4 311 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 AGR3Q8TD06 166 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 KLHL6Q8WZ60 621 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 GRAMD1AQ96CP6 724 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 SLC41A2Q96JW4 573 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 MAGEB10Q96LZ2 347 aaPredicted RBP8.16□□□□□ -1.1
SGMS1-211ENST00000626236 FCRL4Q96PJ5 515 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 DEPDC7Q96QD5 511 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 KCNA7Q96RP8 456 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 STRADBQ9C0K7 418 aa8.16□□□□□ -1.1
SGMS1-211ENST00000626236 C20orf27Q9GZN8 174 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms