RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	ACVR1C	Q8NER5	493 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	PSMA8	Q8TAA3	256 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	UTP15	Q8TED0	518 aa	Known RBP	5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	RTP4	Q96DX8	246 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	ADGRG7	Q96K78	797 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	GFI1	Q99684	422 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	CMKLR1	Q99788	373 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	C11orf49	Q9H6J7	331 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	TMEM30A	Q9NV96	361 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	EXOC6B	Q9Y2D4	811 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	PDS5A	Q29RF7	1337 aa	Known RBP	5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	NOTCH4	Q99466	2003 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	LCT	P09848	1927 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891		A0A1W2PPM1	405 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	ANKUB1	A6NFN9	424 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	C4orf47	A7E2U8	309 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	TRIM77	I1YAP6	450 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	TMEM189-UBE2V1	I3L0A0	370 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	DVL1	O14640	695 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	MOCS3	O95396	460 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	RAB40AL	P0C0E4	278 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	CORO1A	P31146	461 aa	Known RBP	5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	PRKCI	P41743	596 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	ART1	P52961	327 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	CLDN20	P56880	219 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	MZT1	Q08AG7	82 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	UBE2V1	Q13404	147 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	SF3B4	Q15427	424 aa	Known RBP eCLIP	5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	SHH	Q15465	462 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	CDO1	Q16878	200 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	TTC31	Q49AM3	519 aa	Predicted RBP	5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	ZNF585B	Q52M93	769 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	KRTCAP3	Q53RY4	240 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	ZNF324B	Q6AW86	544 aa	Predicted RBP	5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	FIGLA	Q6QHK4	219 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	PRSS57	Q6UWY2	283 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	GET4	Q7L5D6	327 aa	Predicted RBP	5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	SLC4A11	Q8NBS3	891 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	SDR42E1	Q8WUS8	393 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	ABTB1	Q969K4	478 aa	Predicted RBP	5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	SPDL1	Q96EA4	605 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	SFXN2	Q96NB2	322 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	QRFPR	Q96P65	431 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	ZNF385A	Q96PM9	386 aa	Known RBP	5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	INTS14	Q96SY0	518 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	RIOK1	Q9BRS2	568 aa	Known RBP	5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	API5	Q9BZZ5	524 aa	Known RBP	5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	DDX31	Q9H8H2	851 aa	Known RBP	5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	HHATL	Q9HCP6	504 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	CUL9	Q8IWT3	2517 aa		5.41	□□□□□ -1.54
NRXN1-223	ENST00000625891	MYH7	P12883	1935 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	GREB1L	Q9C091	1923 aa	Predicted RBP	5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891		A0A1W2PP11	408 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	SLC33A1	O00400	549 aa	Predicted RBP	5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	PTGES	O14684	152 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	BUD23	O43709	281 aa	Known RBP	5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	SURF6	O75683	361 aa	Known RBP	5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	IDH1	O75874	414 aa	Known RBP	5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	MT-ND3	P03897	115 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	FAM58BP	P0C7Q3	252 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	OR2T7	P0C7T2	308 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	GABRA5	P31644	462 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	SNU13	P55769	128 aa	Known RBP	5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	GABPA	Q06546	454 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	AP1B1	Q10567	949 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	SNTA1	Q13424	505 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	KLHL26	Q53HC5	615 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	TATDN1	Q6P1N9	297 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	ZNF449	Q6P9G9	518 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	GFRAL	Q6UXV0	394 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	GBP6	Q6ZN66	633 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	C15orf39	Q6ZRI6	1047 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	PHLDB2	Q86SQ0	1253 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	TLK2	Q86UE8	772 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	TDH	Q8IZJ6	230 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	SYCP3	Q8IZU3	236 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	ZNF611	Q8N823	705 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	NAT8L	Q8N9F0	302 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	NHLRC2	Q8NBF2	726 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	DNASE1L2	Q92874	299 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	ATP6V0A1	Q93050	837 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	BICD1	Q96G01	975 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	CABS1	Q96KC9	395 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	MTERF1	Q99551	399 aa	Known RBP	5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	OLFM1	Q99784	485 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	FN3K	Q9H479	309 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	EBF2	Q9HAK2	575 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	MID1IP1	Q9NPA3	183 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	MOSPD1	Q9UJG1	213 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	CPSF3	Q9UKF6	684 aa	Known RBP	5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	ITGA11	Q9UKX5	1188 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	KCNK7	Q9Y2U2	307 aa		5.4	□□□□□ -1.54
NRXN1-223	ENST00000625891	MAGEA13P	A6NCF6	341 aa		5.39	□□□□□ -1.55
NRXN1-223	ENST00000625891	C15orf62	A8K5M9	175 aa		5.39	□□□□□ -1.55
NRXN1-223	ENST00000625891	T	O15178	435 aa		5.39	□□□□□ -1.55
NRXN1-223	ENST00000625891	XRCC3	O43542	346 aa		5.39	□□□□□ -1.55
NRXN1-223	ENST00000625891	RTN2	O75298	545 aa		5.39	□□□□□ -1.55
NRXN1-223	ENST00000625891	PGK2	P07205	417 aa		5.39	□□□□□ -1.55
NRXN1-223	ENST00000625891	SNRNP70	P08621	437 aa	Known RBP	5.39	□□□□□ -1.55
NRXN1-223	ENST00000625891	CYBA	P13498	195 aa		5.39	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms