RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 ZNF501Q96CX3 271 aaPredicted RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 PDLIM5Q96HC4 596 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 FCRL4Q96PJ5 515 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 CCNL2Q96S94 520 aaPredicted RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ZFYVE21Q9BQ24 234 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 EFHD1Q9BUP0 239 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ALG9Q9H6U8 611 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 FAM60AQ9NP50 221 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 SLC6A20Q9NP91 592 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 EURLQ9NYK6 297 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 SEMA5BQ9P283 1151 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ANKMY1Q9P2S6 941 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 PSMC3IPQ9P2W1 217 aaPredicted RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 TBK1Q9UHD2 729 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 GPN3Q9UHW5 284 aaPredicted RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ACSL6Q9UKU0 697 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 PADI1Q9ULC6 663 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 SNX7Q9UNH6 387 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 NOVA2Q9UNW9 492 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ANGPTL3Q9Y5C1 460 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 AP1M2Q9Y6Q5 423 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 A0A087WV48 116 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 A0A1W2PPV9 198 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TARM1B6A8C7 271 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 H7BY64 318 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TAF4O00268 1085 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CLGNO14967 610 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 ZNF749O43361 778 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CCNT2O60583 730 aaKnown RBP6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TIAF1O95411 115 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 C1QAP02745 245 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 SERPIND1P05546 499 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 C2P06681 752 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 MSL3P1P0C860 447 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 SLC35E2BP0CK96 405 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 MYBL2P10244 700 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CDH1P12830 882 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 NID1P14543 1247 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CD1DP15813 335 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 KRT15P19012 456 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TCN2P20062 427 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 HRH2P25021 359 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 SLCO1A2P46721 670 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CCR8P51685 355 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 ARSFP54793 590 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 VSNL1P62760 191 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 RPS15P62841 145 aaKnown RBP6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 IRF9Q00978 393 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TLE3Q04726 772 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 PRDX1Q06830 199 aaKnown RBP6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 ABHD18Q0P651 414 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TGFBIQ15582 683 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 ZKSCAN8Q15776 578 aaPredicted RBP6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 ZIC1Q15915 447 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 ERCC6LQ2NKX8 1250 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TSNAXIP1Q2TAA8 658 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 COL28A1Q2UY09 1125 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 PTCHD3Q3KNS1 767 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TCTE1Q5JU00 501 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 ARHGAP40Q5TG30 622 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 C1orf189Q5VU69 101 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TLDC1Q6P9B6 456 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 LCTLQ6UWM7 567 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 SBSNQ6UWP8 590 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CNPY4Q8N129 248 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CSNK1A1LQ8N752 337 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 FLVCR1-AS1Q8TAF5 88 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 NKD1Q969G9 470 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 KIAA1191Q96A73 305 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 NXNL1Q96CM4 212 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 MTBPQ96DY7 904 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CABS1Q96KC9 395 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 PRAP1Q96NZ9 151 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 PLCD4Q9BRC7 762 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 MCMBPQ9BTE3 642 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 FUT8Q9BYC5 575 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 ANKZF1Q9H8Y5 726 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CPNE5Q9HCH3 593 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 STARD5Q9NSY2 213 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 PCMTD2Q9NV79 361 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 NUDT4Q9NZJ9 180 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CPSF2Q9P2I0 782 aaKnown RBP6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 ZNF180Q9UJW8 692 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 CROTQ9UKG9 612 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 PILRAQ9UKJ1 303 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 PADI2Q9Y2J8 665 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TMEM184BQ9Y519 407 aaPredicted RBP6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 KCNE2Q9Y6J6 123 aa6.92□□□□□ -1.3
NPLOC4-221ENST00000625705 TLDC2A0PJX2 215 aa6.91□□□□□ -1.3
NPLOC4-221ENST00000625705 OR2A25A4D2G3 310 aa6.91□□□□□ -1.3
NPLOC4-221ENST00000625705 ZNF891A8MT65 544 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-221ENST00000625705 UBXN8O00124 270 aa6.91□□□□□ -1.3
NPLOC4-221ENST00000625705 TXNDC9O14530 226 aa6.91□□□□□ -1.3
NPLOC4-221ENST00000625705 HAT1O14929 419 aa6.91□□□□□ -1.3
NPLOC4-221ENST00000625705 PRICKLE3O43900 615 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-221ENST00000625705 SRPX2O60687 465 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-221ENST00000625705 CTSVO60911 334 aa6.91□□□□□ -1.3
NPLOC4-221ENST00000625705 KERAO60938 352 aa6.91□□□□□ -1.3
NPLOC4-221ENST00000625705 SMIM24O75264 130 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms