RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 GPC2Q8N158 579 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 DTWD1Q8N5C7 304 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 HTR3CQ8WXA8 447 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 PHF21BQ96EK2 531 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 CELF6Q96J87 481 aaKnown RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 SPATA13Q96N96 652 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 MNTQ99583 582 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 DPYSL5Q9BPU6 564 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 AP5M1Q9H0R1 490 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 LHX5Q9H2C1 402 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 PIGUQ9H490 435 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 RC3H2Q9HBD1 1191 aaKnown RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 TNFRSF12AQ9NP84 129 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 SLAMF7Q9NQ25 335 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 TRPM5Q9NZQ8 1165 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 AKAP7Q9P0M2 348 aaPredicted RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 LEF1Q9UJU2 399 aaPredicted RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 IGLV3-22A0A075B6J6 115 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 A0A096LPI6 279 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 SLC22A23A1A5C7 686 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 ASB14A6NK59 587 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 HRO43593 1189 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 PSAPP07602 524 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 CSF3P09919 207 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 TSPAN8P19075 237 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 C21orf33P30042 268 aaPredicted RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 RGS6P49758 472 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 RAB13P51153 203 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 C2orf80Q0P641 193 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 ODF1Q14990 250 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 TBCEQ15813 527 aaPredicted RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 ETFDHQ16134 617 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 SH3PXD2AQ5TCZ1 1133 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 ARHGAP17Q68EM7 881 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 NIM1KQ8IY84 436 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 CENPLQ8N0S6 344 aaPredicted RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 DIRAS2Q96HU8 199 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 C3orf30Q96M34 536 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 ZNF285Q96NJ3 590 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 CGRRF1Q99675 332 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 GPR22Q99680 433 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 MND1Q9BWT6 205 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 MCOLN1Q9GZU1 580 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 MED28Q9H204 178 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 BIN3Q9NQY0 253 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 SRRDQ9UH36 339 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 PKP3Q9Y446 797 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 CMAHPQ9Y471 501 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 KCNMB2Q9Y691 235 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 ABCD4O14678 606 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 HGFP14210 728 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 PDGFRAP16234 1089 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 LBPP18428 481 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 GPD1P21695 349 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 SSTR2P30874 369 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 RORCP51449 518 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 KCNQ1P51787 676 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 SOX10P56693 466 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 RPP38P78345 283 aaKnown RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 IFRD2Q12894 506 aaPredicted RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 ZNF460Q14592 562 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 PAGE3Q5JUK9 113 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 RTP2Q5QGT7 225 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 ZNF425Q6IV72 752 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 ZCCHC12Q6PEW1 402 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 ENPP6Q6UWR7 440 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 DBX2Q6ZNG2 339 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 SLC26A9Q7LBE3 791 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 GLCCI1Q86VQ1 547 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 ZZZ3Q8IYH5 903 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 LNX2Q8N448 690 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 TTC29Q8NA56 475 aaPredicted RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 TMEM161BQ8NDZ6 487 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 LPCAT1Q8NF37 534 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 OR52K1Q8NGK4 314 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 FAM162AQ96A26 154 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 RHOJQ9H4E5 214 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 LYARQ9NX58 379 aaKnown RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 ANKRD12Q6UB98 2062 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 MICAL3Q7RTP6 2002 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 SIPA1L1O43166 1804 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 WNT10BO00744 389 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 PCDH17O14917 1159 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 IPO13O94829 963 aaKnown RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 F9P00740 461 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 PFKLP17858 780 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 CYP2F1P24903 491 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 RAB10P61026 200 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 CXCL9Q07325 125 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 SNAPC1Q16533 368 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 CAPN13Q6MZZ7 669 aaPredicted RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 C5orf46Q6UWT4 87 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 SAMD7Q7Z3H4 446 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 SLC9B2Q86UD5 537 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 TSPYL5Q86VY4 417 aaPredicted RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 HEXDCQ8WVB3 486 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 TCEAL3Q969E4 200 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 GPR78Q96P69 363 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 CNPPD1Q9BV87 410 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 ASPNQ9BXN1 380 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms